Pseudomonas fluorescens A506: PflA506_2512
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Entry
PflA506_2512 CDS
T02114
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_2512 (sbcC)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PflA506_2512 (sbcC)
Archaeal homologous recombinant proteins
PflA506_2512 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
nSTAND3
RsgA_GTPase
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFJ57181
LinkDB
All DBs
Position
complement(2751171..2754809)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEAKDAHKQLQDQATGVVPLAPEARAELDQQLA
QAQQQLKSQQAQLKQLELQHTWLKELREWQERHQHAVEQLQRDEQTWADQGQQRQDLSLL
EQLAPQRHHFLRQAELATLLTPLAAQIAQHLEQQTALHTRQEQAQHQQVAAQAALAEALK
HQADAAPLLRQAIEEQNTLAHVSRELAKRNEEKHQHESACTEGQALLDGLQHTQAQGTER
LQRLATELEHSAALAPLSDAWNAYRDRLQQLVLIGNRLNQGQAELGQLEQRASAANEQFT
QQREALDLLYHEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLARLWDSQQQLDQQASA
LTQRLAEAAQKREQLNQTGLQTKAELTVAEQTLTVTKQLLERQRLARSASVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDESEEAAAQKAVDSLKEQLTELRGEVGGLIAQQ
KEFLQQQEQLAMQQQGLAPSLQAHPLSASLLAQDAAKRSPWLAQQLAQLTQSISQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRQLAGDRERLEAEISAFASLLPSET
LEGLRSAPAATFMQLDQQVSQRLEQLGHQRDEQAEQQERQQAIEKQHTHQQHRQQQLDAL
NLQVAELADQQHAVQEKLRALLGDHPSAEHWQQQLEQAVTQSRQSETDANQELHAVHTAQ
VQLAADLKAQQHHQQALEAEQQALASRIGEWRALHPDLDDQGLARLLALDEAQVAQLRQH
LHSSEKAVEQAKVLLHEREQRLAEHQALHNGNLEAEQLAATLATLEQQLLEGEKHCAELR
ARQSEDQRRQNANQALAEQIAKAYEQWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
LQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctccctggcgggcccgttcgaaatc
gactttaccgccgagcccctggccagtgctggcctgttcgccatcaccgggccgactggc
gcggggaaaagcaccctgctcgatgcgttgtgcctggcgctgtttggcgcggtgccgcgc
ctgggtgataccggccaggccaaaatgccggatgccgacacggacatttccatcggcgac
ccgcgcaccctgattcgccgcggcactggcggcggctatgccgaggtggattttgtcggt
gtcagtggccgtcgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggccagc
ggcaagttacagaacagccggcaaagcctgatcgacctggacagcgaccaactgctggcc
agccagaaaaccgaatacaagacccagctggaattggccctgggcctgaacttcgaacag
ttcacccgtgcggtgctgctggcgcaaagcgagttcagcgccttcctcaaggccaatgac
aatgagcgcagcgaactgctggaaaagctcaccgacaccgcgctctacacccagctcggc
cgccgtgcgttcgacaaggccaaagaggccaaggacgcccacaaacagctacaggaccaa
gccaccggcgtggtgcccctggcccccgaagcccgcgccgagctggatcaacagttggcc
caagcccagcagcagctcaagagccagcaagcccagctcaagcagctggagttgcagcac
acctggctcaaggagctgcgtgaatggcaggagcgccatcagcatgctgtggagcaactg
caacgcgacgagcagacctgggccgaccaaggtcagcaacgccaggacctgagccttctg
gagcagttggcaccgcaacgccatcacttcctgcgccaggcagaactcgccaccttgctg
acgcccctggcggcacagattgcccagcacctcgagcaacaaaccgccctgcacacccgc
caggaacaggcgcaacaccagcaagtggccgcccaggcagcactggccgaggccctgaaa
caccaggccgacgccgcgcccctgctgcgccaggccatcgaagagcaaaacaccctcgcc
cacgtgagccgcgaactggccaagcgcaacgaggaaaaacaccagcacgaaagcgcctgc
accgaaggccaggccctgctcgacggtttgcaacacacgcaggcccaaggcaccgagcgc
ctgcaacgcctagccaccgagcttgagcacagcgccgccctcgcgccgctgagcgatgcc
tggaacgcctaccgtgaccgcctgcaacagttggtgttgatcggcaatcgcctcaaccaa
ggccaggccgagctggggcagctcgaacagcgcgccagcgccgccaatgaacagttcacc
caacagcgcgaagccctggatttgctctaccacgaggccggtgccgaaccgcacgcggtg
gccgaacaaatccagttactggccagcctgctgcaagacaatcgcaagcaacagcgcgcc
ttcgaagacctggcccgcttgtgggacagccagcaacagttggatcaacaggcctctgcg
ctcacgcaaaggctcgccgaggccgcgcaaaaacgcgaacaactgaaccagaccggcctg
caaaccaaggccgaactcaccgttgccgaacaaaccctgacggtgaccaagcaactgctt
gagcgccaacgcctggcccgcagtgccagcgtcgaggaattacgcgagcagttgcaggat
gaccaaccctgcccggtgtgcggtagccacgaacacccctatcaccagcccgaggctctg
ctacagagcctgggtcgccatgatgaaagtgaagaggcggctgcgcagaaagccgtcgac
agcctcaaggaacaacttaccgaactgcgcggtgaagtgggcggcctgatcgctcagcaa
aaagagttcctgcaacaacaggaacagttggccatgcagcagcagggtttggcaccgagc
ctgcaagcccacccactgtcggcctcgctgctcgcccaggacgccgccaagcgcagccct
tggctggcccagcaattggcccaattgacccaaagcatcagccaggacgaacaacgccaa
ggcgccctgctcaacctgcaacagaacgccgggcgcttgcagcaacaattgcaagcggcc
caggacgccagccagcaagcccggcaattgctggtggaccaacaacggcaactggccggc
gaccgcgaacgcctggaggcggaaatcagcgccttcgccagcctgttgcccagcgaaacg
ctggaaggcttgcgcagcgcgcctgcggcgaccttcatgcagctcgaccagcaggtcagc
cagcgccttgagcagttgggccatcaacgcgatgagcaggccgagcagcaggagcgccaa
caggccatcgagaaacaacacactcaccaacagcatcgtcagcagcaactcgacgccttg
aatctgcaagtcgccgagctggccgaccagcaacacgccgtccaggaaaaactccgcgcc
ttgctaggggaccaccccagcgccgagcactggcaacagcagctggagcaagcggtcacg
cagtcgcgccaaagcgagacggacgccaaccaggaactgcacgccgtgcacacggcccag
gtacagctggccgccgacctcaaggcccagcagcaccaccagcaggcattggaggcggag
cagcaagcccttgcgtcacgcatcggcgaatggcgcgccctgcacccagacctggatgat
cagggcctggcacgcctgttggcccttgatgaagcccaggtcgcgcagttgcgccagcac
ctgcacagcagcgaaaaggccgtcgagcaagccaaggttctgctgcacgagcgcgaacag
cgcctggccgaacaccaggccctgcacaatggcaacctggaggccgagcagttggccgcc
accctggcaacgcttgagcaacaattgctcgagggtgagaaacactgcgccgaactgcgc
gcacgccagtccgaagaccagcgccgccagaatgccaaccaggccctggccgaacagatt
gccaaggcttacgagcagtggcagcgctgggcacgcctgaatgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctcgacttgctggtgcaccat
gccaacgtgcaactgcgccaactggtgcgccgctaccggcttaaacgcggcggcagcatg
ctggggctgctggtgatggacacagagatgggcgatgaactgcgctcggtgcattccctg
tccggtggcgaaaccttcctggtgtcgttggcactggcgttggggctagcctcgatggcg
tcgagcaccttgaagatcgagtcgctgtttatcgacgaaggttttggcagccttgatccg
gagtccttgcaattggcgatggacgctctggatggtttgcaggcccagggtcgcaaggtg
gcggtgatctcccacgtacaggaaatgcatgaacgcatcccggtgcagatccaggtaaag
ctccagggcaatggcctgagcacgttggaggtcaagtga
DBGET
integrated database retrieval system
