Pseudomonas fluorescens A506: PflA506_2513
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Entry
PflA506_2513 CDS
T02114
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_2513 (sbcD)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PflA506_2513 (sbcD)
Archaeal homologous recombinant proteins
PflA506_2513 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFJ56590
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Position
complement(2754806..2756047)
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLKAQRPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQQPTLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
DRLLIPLPNAKGKIAAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRNKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPATLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGERLVGCEPILIPRSVNLQRLEAAPLADILKQL
GELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAADYAGTRGSA
EADDAQLIELDQLTPQELFSRAWQDSYGSDVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcatacctccgactggcacttgggccaaaacctccacggccaggaacgc
gacttcgaacacgcctgtttccttgagtggctgctgggccaactcaaggcacagcgcccg
gacgtgctgttgatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcccag
gagcgcttgtatgacttcatcatcagcgcccacgaacaacagccgacactgaccattgtg
atgattgccggcaaccatgactccggttcgcgcattgagctgcctgcgcctctgatgcgc
cgcttgcgcacccatgccctgggccgagtgctgtggctggatgacggacaactggatgcc
gaccgcctgctgatcccgttgcccaatgccaaaggcaagatcgccgcctggtgcctggcg
ctgcccttcctgcgcccggcggaagtcaccggcgcacagctgggcgatgattacctgcgc
ggcatcggccaagtgcatgaatggctgatcgcggccgccaatgccaagcgcaacaaaggc
caggcattgatagccatcagccatgcgcacatggccggtgggtcggtatccgaagactcc
gaacgcagcctgatcatcggcaatgccgaggcgctgcccgccacactgttcgaccgaagc
gtggcatatgtggccctcggccatttgcacaagccgcaaaaggtcaatggcgaggagcgc
attcgctacagcggctcgccaatccccctgtcgttctccgaaatcggctacaagcaccag
attctcgacgtgacgttccagggcgaacggctggtgggctgtgaaccgatcctgattccc
cgctccgtcaacctgcaacgcctggaagccgcgcccctggccgatattctcaagcaactg
ggtgaactgcccgacatcgacctgctcgccgaaacccagcgccacccttggctggaagtg
cgcgtgcgcctcgacgagccgcaaccggacctgcgccagcagatcgaaaccgccctgcaa
ggcaaggccgtgcgcctggtacggatcgccgccgactatgccggcacacgcggcagcgca
gaggcagacgatgcgcaactgatcgaactcgaccagctcacgccccaggagttgttcagc
cgcgcctggcaggacagctacggcagtgacgtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggagggcgaacagccatga
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