Pseudomonas fluorescens A506: PflA506_2619
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Entry
PflA506_2619 CDS
T02114
Symbol
aprD
Name
(GenBank) ABC transporter
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PflA506_2619 (aprD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfc02000
]
PflA506_2619 (aprD)
02044 Secretion system [BR:
pfc02044
]
PflA506_2619 (aprD)
Transporters [BR:
pfc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PflA506_2619 (aprD)
Secretion system [BR:
pfc02044
]
Type I secretion system
Multiple protein transporter
PflA506_2619 (aprD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
nSTAND1
AAA_33
AAA_29
DUF87
nSTAND3
Mg_chelatase
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFJ57288
LinkDB
All DBs
Position
2884503..2886254
Genome browser
AA seq
583 aa
AA seq
DB search
MAKSHGVAPLFRALGEYKSILISVGCFTALINLLMLVPSIYMLQVYDRVLSSQNETTLVM
LTLMVVGFFAFIGLLEVVRSFIVIRIGSQLERRFNLRVYKAAFERNLQRGQGHAGQSLGD
LTALRQFITGPALFAFFDAPWFPIYLFVIFLFNVWLGVLATAGAVLLIGLACLNEYLTKK
PLGEASGYSQQSTQLATSHLHNAETIQAMGMLGALRQRWFGVHSQFLGLQNQASDTGSII
TSLSKSLRLCLQSLVLGLGAYLVIKGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSSA
KLAYQRLDELLREFPPEVEHMALPAPNGQVSFEQVSAGPPGRRMATLHQVSFNLAAGEVL
GVLGASGSGKSTLARVLVGVWPTLAGTVRLDGADIHRWNRDDLGPHIGYLPQDIELFSGS
IADNIARFREADPELVVKAAQQAGVHELILRLPQGYDTVLGDNGGGLSGGQKQRVALARA
LYGGPRLIVLDEPNSNLDTVGEAALASAIMQMKAQGSSVVLVTHRSSALAQADKLLVLGE
GQLQAFGPSQEVLRALSGQQEAPKEKTGVSFSRHYQAGRNPGA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcccatggggtggcgcccttattcagggcgttgggtgaatacaagagtatt
ttgatcagcgttggctgtttcacggcattgattaacctattaatgctggtgccctcgatt
tacatgctgcaagtgtatgaccgggtgttgtcctcccagaatgaaaccaccctggtgatg
ttgacgctgatggtcgtgggcttctttgcgtttatcggcctgctggaagtggtgcgcagc
tttatcgtgatccgcattggcagccagttggagcgacgtttcaacttgcgcgtgtacaaa
gccgcgttcgaacgcaacctgcagcgcggccaagggcacgccgggcaatccttgggcgac
ctgaccgctctgcgccaattcatcacggggccagcgctgttcgcgtttttcgatgcgccg
tggttcccgatctacctgttcgtgattttcctgttcaatgtgtggctcggcgtgctggcc
acggccggcgcggtgctgttgattggcctggcgtgccttaacgaatacctgaccaaaaag
ccattgggcgaggccagcggttattcgcagcagtccacccaactggccaccagccatttg
cacaacgccgaaaccatccaggccatgggcatgctcggtgcgctgcgccaacgctggttt
ggcgtgcattcgcagttcctgggcttgcagaaccaggccagcgacaccggttcgatcatc
acctccttaagcaaatccttgcgcctgtgcctgcaatccttggtgctgggcctgggcgcc
tacctggtgatcaagggcgacatgaccgccggcatgatgatcgcaggctccatcttgatg
ggccgcgtactcagccccatcgaccaactgattgcagtgtggaagcaatggagttcggcc
aagctggcctatcagcgcctcgacgaactgctgcgcgaattcccgccagaggtcgagcac
atggccttgcctgcgcccaacggccaagtcagtttcgagcaggtcagcgccggcccgccg
gggcggcgcatggcgaccctgcatcaggtcagctttaacctggccgccggtgaagtgctg
ggcgtgctcggcgcgtccggttccggtaagtccaccctggctcgcgtgctggtgggcgtg
tggccaaccctggccggtaccgtacgcctggacggcgcggatattcaccgctggaaccgc
gacgacctcggcccgcatatcggctatttgccccaggacatcgagctgtttagtggcagc
atcgccgacaacatcgcgcgctttcgcgaggccgacccggaactggtggtcaaggccgcg
caacaggccggcgtgcatgaactgatcctgcgcctgccccaaggctacgacaccgtgctg
ggcgacaacggcggtggcttgtccggcggccagaaacaacgcgtggccctggcccgcgcc
ctgtacggcgggccgcgcctgatcgtgctggacgaacccaactccaacctcgacaccgtc
ggcgaagccgcattggccagcgccatcatgcagatgaaagcccagggcagcagcgtggtg
ctggtcacccatcgttcctcggcattggcccaggccgataagttgctagtgctcggcgaa
ggccaactgcaagcgttcgggcccagtcaggaggtgctgcgggcgttgtccgggcagcag
gaagcgccgaaagaaaaaaccggtgtcagcttcagccgtcactaccaggccggaaggaat
ccaggcgcatga
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