Pseudomonas fluorescens A506: PflA506_2752
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Entry
PflA506_2752 CDS
T02114
Name
(GenBank) DNA topoisomerase I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_2752
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_2752
Enzymes [BR:
pfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PflA506_2752
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Topoisomerases
PflA506_2752
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PflA506_2752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFJ55255
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All DBs
Position
3041223..3042272
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AA seq
349 aa
AA seq
DB search
MPDSSLPADLPRDLHYVDDTQPGIRRKKVRGKFQYLNAKGERITDADEIKRLNALAVPPA
YTDVWICADPRGHLQATGRDARGRKQYRYHQRWREVRDSDKYSRLQAFGAALPRLRKQLE
AQIAEPGFTREKVLATVVMLLDATLIRVGNTQYARENKSYGLTTLRNRHVDIKGSEIQFQ
FRGKSGVEHQVSVKDRRLARVVKRCMELPGQNLFQYLDEDGERHTVSSQDVNDYLHRLTG
EDFTAKDYRTWAGTAMALAVLRELAWQPESDAKRHVVAMVKDVARQLGNTPAVCRKCYIH
PAVLEHFSLGELSKLPKPRVRKGLKAEEVALAMFLEKLAEDLPHKVEVG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcttcgttacccgccgacctgcctcgcgacctgcattatgtggatgacacc
cagcccggcatccgccgtaaaaaagtgcgaggcaaattccagtatctgaacgccaaaggc
gagcgcattaccgacgcggacgaaatcaaacgcctgaacgccttggcggtgccacccgcc
tacaccgatgtgtggatctgcgccgaccctcgcggccacctgcaagccaccggccgcgac
gcccgtggccgtaagcagtaccgttaccaccaacgctggcgcgaggtgcgcgacagcgac
aagtactcgcgcttacaggcttttggcgccgctttgcccagattgcgcaaacagctcgaa
gcacaaatcgccgagccggggtttacccgcgaaaaggtgttggccacggtggtgatgttg
ctggacgccacgctgatccgcgtcggcaatacccaatatgcccgtgaaaacaaatcctac
ggcctgaccaccctgcgcaaccgccatgtggacatcaagggcagcgagatccagttccag
tttcgtggcaagagtggcgtggagcaccaagtcagcgtcaaggatcggcgcctggcccgg
gtggtcaagcgttgcatggaattgccagggcaaaacctgttccagtacctggacgaagac
ggtgagcggcataccgtcagctcccaggacgtcaacgactacctgcaccgcctgaccggc
gaagactttaccgccaaggactaccgcacctgggccggcacagcaatggcgctggcggtg
ttgcgcgagttggcgtggcagcccgaatccgacgctaagcggcatgtggtggcgatggtc
aaggatgtcgcccggcagctgggcaacacgccggcggtgtgccgcaagtgctatatccac
ccggcggtgcttgagcatttcagcctcggtgaattgtcgaagctgcccaagccgcgagtg
cgcaaaggcctgaaagccgaagaagtcgcgctggcaatgttcctggaaaaactggccgaa
gacttgccgcacaaagttgaggtgggttag
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