Pseudomonas fluorescens A506: PflA506_3340
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Entry
PflA506_3340 CDS
T02114
Symbol
bkdC
Name
(GenBank) 2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00010
Glycolysis / Gluconeogenesis
pfc00020
Citrate cycle (TCA cycle)
pfc00260
Glycine, serine and threonine metabolism
pfc00280
Valine, leucine and isoleucine degradation
pfc00310
Lysine degradation
pfc00380
Tryptophan metabolism
pfc00620
Pyruvate metabolism
pfc00630
Glyoxylate and dicarboxylate metabolism
pfc00640
Propanoate metabolism
pfc00670
One carbon pool by folate
pfc00785
Lipoic acid metabolism
pfc01100
Metabolic pathways
pfc01110
Biosynthesis of secondary metabolites
pfc01120
Microbial metabolism in diverse environments
pfc01200
Carbon metabolism
pfc01210
2-Oxocarboxylic acid metabolism
pfc01240
Biosynthesis of cofactors
Module
pfc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pfc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pfc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PflA506_3340 (bkdC)
00020 Citrate cycle (TCA cycle)
PflA506_3340 (bkdC)
00620 Pyruvate metabolism
PflA506_3340 (bkdC)
00630 Glyoxylate and dicarboxylate metabolism
PflA506_3340 (bkdC)
00640 Propanoate metabolism
PflA506_3340 (bkdC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PflA506_3340 (bkdC)
00280 Valine, leucine and isoleucine degradation
PflA506_3340 (bkdC)
00310 Lysine degradation
PflA506_3340 (bkdC)
00380 Tryptophan metabolism
PflA506_3340 (bkdC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PflA506_3340 (bkdC)
00670 One carbon pool by folate
PflA506_3340 (bkdC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfc04147
]
PflA506_3340 (bkdC)
Enzymes [BR:
pfc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PflA506_3340 (bkdC)
Exosome [BR:
pfc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PflA506_3340 (bkdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
GIDA
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
UDPG_MGDP_dh_N
MCM_bind
Motif
Other DBs
NCBI-ProteinID:
AFJ57973
LinkDB
All DBs
Position
3738819..3740198
Genome browser
AA seq
459 aa
AA seq
DB search
MTQTLHTTLLIIGGGPGGYVAAIRAGQLGIPTILVEGQALGGTCLNIGCIPSKALIHVAE
QFQQTVHHSQGSQLGIEVDVPTLDIRKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAK
VIDGKTVEVGEQRIQCEHLLLATGSTSVNLPMLPIGGPIISSTEALAPTHVPKRLIVVGG
GYIGLELGIAYRKLGADVSVVEAQAHILPAYDAELTLPVAESLKKLGVKLYLEHSVTGFA
DGKLQVRAPNGDILALDTDQVLVAVGRKPNTQGWNLEALNLDMNGVAIKIDSRCQTSMRN
VYAIGDLSGEPMLAHRAMAQGEMVAELISGKAREFNPAAIPAVCFTDPELVVVGKTPDEA
KAAGLDCIVSSFPFAANGRAMTLESKAGFVRVVARRDNHLIVGWQAVGAGVSELSTAFGL
SLEMGARLEDVAGTIHAHPTLGEAVQEAALRALGHALHL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacattgcacaccacgctgctgattatcggcggcggccccggcggttatgtc
gcggcgattcgcgcaggccaactgggcatcccgaccatcctggtggaaggccaggcgctg
ggcggcacctgcctgaacattggctgcattccctccaaggcgctgatccatgtggccgag
cagttccagcaaaccgtgcaccatagccagggctcgcagttgggcattgaggtggatgta
ccgactttggacatccgcaagagcgtggaatggaaagacggcatcgttgaccgcctgacc
accggcgtcgccgcactgctgaaaaaacataaggtgcaggtgatccatggctgggccaaa
gtcatcgacggcaagaccgtcgaggtgggcgagcagcgcatccagtgcgaacacctgctg
ttggccaccggctcgacaagcgtcaacctgccgatgctgccgattggcgggccgattatc
tcgtccaccgaagccctggcaccgacccatgtacccaaacgtttgatcgtggtgggcggt
ggttatatcggcctggaactggggattgcctaccgcaagctgggtgccgacgtcagcgtg
gtcgaggcccaggcgcacattctgccggcctacgacgccgagctgaccctgccggtggct
gaatccttgaagaaacttggcgtgaagctgtacctggaacacagcgtcaccggctttgcc
gacggcaaactgcaggtgcgcgcccccaacggcgacatcttggcgctggacaccgaccag
gtgctggtcgccgtggggcgcaaacccaacacccagggttggaacctcgaagcgctgaac
ctggacatgaacggcgtggcgatcaagatcgacagccgctgccagaccagcatgcgcaac
gtgtacgccatcggcgacctcagcggcgagccgatgctggcgcaccgggccatggcccag
ggcgaaatggttgccgaactgatcagcggcaaggcccgcgaattcaacccggcggcaatt
ccggcggtgtgctttaccgacccggaactggtggtggtcggcaagaccccggacgaggcc
aaggctgccggcctggattgcattgtgtcgagcttccccttcgccgccaatggccgggcc
atgacgctggagtccaaagccggcttcgtgcgggtggtggcgcgacgtgacaatcacttg
attgttggctggcaagccgtgggggccggagtgtccgagctgtcgaccgcgttcggcctg
agcctggaaatgggtgcgcgcctggaggatgtggctggcaccatccatgcccacccgact
ctgggtgaagcggtgcaggaagccgcgctgcgggcgttgggccacgcgttgcacctgtaa
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