Pseudomonas fluorescens A506: PflA506_3521
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Entry
PflA506_3521 CDS
T02114
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PflA506_3521 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_3521 (uvrB)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PflA506_3521 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PflA506_3521 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AFJ54713
LinkDB
All DBs
Position
complement(3922600..3924615)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQTNRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLASLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRDSGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE
IEIRPALTQVDDLLSEINKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLEHGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgttacccgttttgaacccgccggcgatcaaccggaagccatt
cgtcagatggtcgaaggcatcgaggccggcctggcgcaccagacgctgcttggggtgacc
gggtccggcaagaccttcagcatcgccaacgtgatcgcccagaccaaccgcccgaccctg
gtgctggcgccgaacaaaaccctggcggcgcagctctatggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtatttcgtttcctactacgactactaccagcccgaagcctat
gtgccgtcgtccgatacctttatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcgcctgtcggccaccaaggcactgctggagcgcaaagacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcttgggcagcccggaaacctatctgaagatggtgctgcacgtc
gaccgtggtgacaaactcgaccagcgcgaattgctgcggcgcctggcgagcctgcagtac
acccgtaacgacatggattttgcccgcgccaccttccgggtgcgcggcgatgtgatcgac
atctacccggcggaatccgacctggaagcgattcgcatcgagctgttcgatgatgaggtc
gaaagcctgtcagccttcgacccgttgaccggtgaagtgatccgcaagctgccacgcttc
accttctaccccaaaagccattacgtgaccccacgcgaaaccttgatgggcgccatcgag
ggcatcaaggtcgagctggccgagcgcctggaatacttgcgctccaacaataagctggtg
gaagcccagcgcctggagcagcgcactcgcttcgacctggagatgatcctggaactgggt
tactgcaacggcatcgaaaactactcgcgttacctgtcgggccgtgactccggggcgccg
ccaccgacgctctatgactacctgccgccggacgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtgggcgccatgtataagggcgaccgttcgcgcaaggaaaccctg
gtggaatacggtttccgcctgccgtcggcgctggacaaccggccgatgcgctttgacgag
tgggaagccatcagcccgcagaccatcttcgtctccgctacgcccggcaactatgaagcc
gagcacgcgggccgcgtcatcgagcaactggtacgtcccactggcctggtggacccggaa
atcgaaatccgccccgcgctgacccaggtcgacgacttgctctcggaaatcaacaagcgc
gtggccctggaagagcgggtgctggtcaccactctgaccaagcgcatgtccgaagacttg
actgattacctggccgaccacggcgtgcgcgtgcgttacctgcactcggacatcgacact
gtggaacgcgtggaaatcatccgcgacctgcgcctgggcacctttgatgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggcgatcctggat
gcggacaaggagggcttcctgcgctccgaacgctcgctgatccagaccatcggccgagcg
gcgcgtaacctcaatgggcgggcgatcctgtatgcggaccgcatcaccggttccatggag
cgtgcgattggcgagacccagcgtcgtcgcgacaagcagatcgcgttcaacctggaacat
ggcatcacccccaagggcgtgttcaaggacgttgccgacatcatggaaggcgccaccgtg
ccaggctcgcgcagcaagaagcgcaagggcatggccaaggctgccgaggaaagtgccaag
tacgagaacgaactgcgctcgccgagtgagatcaccaagcggattcggcagttggaagaa
aaaatgtaccagctggcgcgggatctggagtttgaagcggcggcgcagacgcgtgatgag
attggcaagttgcgtgagcgtctgttggctgtttga
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integrated database retrieval system
