Pseudomonas fluorescens A506: PflA506_3834
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Entry
PflA506_3834 CDS
T02114
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfc03009
]
PflA506_3834
Enzymes [BR:
pfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PflA506_3834
Ribosome biogenesis [BR:
pfc03009
]
Prokaryotic type
rRNA helicases
PflA506_3834
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AFJ58582
LinkDB
All DBs
Position
complement(4246970..4248316)
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AA seq
448 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM
LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgcttaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaagcagcggccatcccgctcgcgctgcaagggcgtgacctg
cgggtgacggcgcaaaccggcagcggcaagaccgccgctttcgtcctgccggtacttaac
cgcctgatcggcccggccaaggtgcgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcaaaccctgaaggaagtcgaacgcttttcgcagttcaccttcatc
aagtccggcatcatcaccggtggcgaagacttcaaggtccaggccgcgatgctgcgcaag
gtgccggacatcctgatcggcaccccagggcgcatgatcgagcaactcaacgctggcaac
cttgatctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgatgatgtgcaacgtctggtcggcgagtgcgtcaaccgccagcagaccatg
ctgttctccgccaccaccggtggttcgaccctgcgcgacatggtcgccaaggtgctgaac
aaccctgagcacttgcaggtcaacaacgtcagcgacctgaacgccaccacgcgtcagcag
atcgttaccgctgaccataacgtgcataaagaacagatcctgaactggttgctggccaac
gagacctaccagaaggccatcgtgttcaccaacacccgtgccgccgccgaccgtatctac
gggcgcctggttgcgcaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gaccgcaagctggccatcgaccgtctcaaggcgggcggcgtgaagatcctggtggccacc
gacgttgccgcgcgcggcctcgacgtggacggcctggacctggtgatcaacttcgacatg
ccccgcagcggcgacgaatacgtgcaccgcatcggccgtaccggacgggccggcaacgat
ggcctggccatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgaacgc
tacctgaagcagtcgttcgagcgccgcaccatcaaggaagtcaaaggcacgtacaccggg
ccgaagaaggtcaaggcgtcgggcaaggccgttggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaaaaaaaccgccgccaagtcaccgaccaagcgcaagatcgccaaccgg
ccgaagaccgacaacctgtcgctcgtcagcaaggacggcatggccccgctcaagcgccgc
aagccagaagctccggctgccgaataa
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