Pseudomonas fluorescens A506: PflA506_3880
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Entry
PflA506_3880 CDS
T02114
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03030
DNA replication
pfc03430
Mismatch repair
pfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PflA506_3880 (dnaX)
03430 Mismatch repair
PflA506_3880 (dnaX)
03440 Homologous recombination
PflA506_3880 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_3880 (dnaX)
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_3880 (dnaX)
Enzymes [BR:
pfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PflA506_3880 (dnaX)
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PflA506_3880 (dnaX)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PflA506_3880 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
TIP49
AAA_18
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
DUF3646
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AFJ58857
LinkDB
All DBs
Position
complement(4296254..4298335)
Genome browser
AA seq
693 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSADAPRQPLKPVGISQATVDSAKPVAGAAVVAPVVAAPAVAVPEPVAPAPEPEPAPVA
VAPVVEPEPVIEPEPEPVVDLPWNDPVEAQVEPEQQPAVEPVLETTGEQPELTPMPTPTP
DSVVPDAPEWVSAPVPEPTVAQVDAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDELASE
HTAEPAPEPEAEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLISIEGDHWLLHLD
PAHSALFNATQQRRLNDALNQYHGRTLTIAIELIKPEQETPAQAATRRRLNRQREAEDSI
HADPLIQQMMQQFGAVVRHDTIEPVEAPVPQAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgcccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccaacggctgcaccacgcc
tacctgttcaccggtacgcgcggggtgggcaagaccacgattgcgcgcatcatcgccaaa
tgcctgaattgtgaaaccggtattacctcgacgccttgtggcacctgttcggtgtgccgt
gagatcgacgaagggcgtttcgtcgacctgatcgagatcgacgccgcgagtcgtaccaag
gtcgaagacacccgcgaactgctggacaacgtgcagtacgcgccgagccgtggccgcttc
aaggtctacctgatcgacgaagtgcacatgctgtccagccactccttcaacgccttgttg
aaaaccctggaagagccgccgccctacgtcaaattcatcctggccaccaccgacccgcag
aaacttccggcaacgattttgtcgcggtgcctgcagttctccctgaaaaacatgaccccc
gagcgtgtggtcgagcatttgacccacgtgctgggcgtcgagaacgtaccgttcgaagac
gacgcgctgtggttgctgggccgtgccgccgatggttcgatgcgcgatgccatgagcctc
accgaccaggccatcgcgtttggtgaaggcaaggtcatggccgccgacgtgcgcgccatg
ctcggtaccctggaccacggccaggtgttcgacgtgctgcacgcgctgatcgagggtgac
gccaaggcgttgctcgaagcggtgcgccacctgtcggagcaaggcccggattggaatggc
gtgctttcggaaatcctcaacgtattgcaccgcgtcgccatcgcccaggccctgccggaa
ggcgtggacaacggtcatggcgaccgtgatcgcgtattggccctggcccaggccttgccg
gccgaagacgtgcagttctactaccagatgggcctgatcggtcgccgcgacttgcccctg
gcacccgacccgcggggtggctttgaaatggtgctgctgcgcatgctggcgttccggccg
gcagattcggcagacgcaccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgccaaacccgtggctggggcggccgttgtcgcgccagtagttgcagcgcct
gcggttgctgtgcctgagccggttgcgccggcacctgagcctgaacctgcgccggttgcc
gtcgcaccggtggtcgagcccgagccggtcattgagcccgagcccgaacccgtggtcgac
ttgccctggaatgacccggtcgaagcgcaagtagagcccgagcaacagcccgccgtggag
cccgtgctggaaaccaccggcgagcaacccgagctgacgccgatgcctacgccgactccg
gacagcgtggtgccggatgcccctgagtgggtatcggcgcccgttcctgaaccgacggtc
gcccaggtcgacgcggccacgccgggcattgacctggatgacgaaccgccgctggacgaa
gactacatcgagccggacatggattcggcctacagctacctggacgaactggccagcgag
cacaccgcggaaccggcgcccgagcccgaggcagaacctgccgcggccccggctaccggt
ctggccctgcaatggctggaattgtttccgaaattgccgatctccggcatgaccggcagt
atcgccgccaactgcaccctgatttccatcgaaggcgaccactggctgctgcacctggac
ccggcccatagcgccttgttcaacgccacccagcagcgccggctcaacgatgcgctcaac
cagtaccatgggcgcacgctgaccattgccatcgagctgatcaagcccgagcaggaaacg
ccggcccaggccgcgacccgtcggcgccttaaccgccagcgcgaggctgaggattcgatc
cacgcagatccgcttatccaacaaatgatgcaacagttcggtgcggtcgtccgccacgat
actattgaacctgtcgaagccccggtgccccaagcgtcatga
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