Pseudomonas fluorescens A506: PflA506_4006
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Entry
PflA506_4006 CDS
T02114
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03030
DNA replication
pfc03430
Mismatch repair
pfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PflA506_4006 (holB)
03430 Mismatch repair
PflA506_4006 (holB)
03440 Homologous recombination
PflA506_4006 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_4006 (holB)
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_4006 (holB)
Enzymes [BR:
pfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PflA506_4006 (holB)
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PflA506_4006 (holB)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PflA506_4006 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_22
AAA_5
HolB_lid
iSTAND
TsaE
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFJ57571
LinkDB
All DBs
Position
complement(4433132..4434121)
Genome browser
AA seq
329 aa
AA seq
DB search
MAESYPWQDGLWQQLAGRAQHAHAYLLHGPVGIGKRHLAERLMGSLLCQRPVNLEACGEC
KSCLLLKAGSHPDNYVLEPEEADKAIKVDQVRDLVSFVVQTAQMGGRKVVLIEPVEAMNI
NAANALLKSLEEPSGDTVLLLVSHQSSRLLPTIRSRCVQQACPLPSEDMSLQWLAQALPE
CSAEERGELLTLAAGSPLAAVKLQAQGVREQRALVVDGVKKLLKQELSATQLAESAWKDI
PLLLLFDWFCDWSSLILRYQLTQDEQGLGLADMRKVVQYLAQKSAQDKVLNIQDWILAQR
QKVLGKANLNRVLLLEALLVQWVGLLGRR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagtcctacccgtggcaggacggcctctggcagcaactggcagggcgcgcccag
cacgcccacgcctatctgctgcatgggccggtgggcatcggtaaacgccacctcgccgaa
cgcctgatgggcagcctgttgtgccaacgcccagtcaacctggaggcgtgtggcgagtgc
aagtcctgcctgttgctcaaggctggcagtcacccggacaattatgtgctggaacccgag
gaagcggacaaggccatcaaggtcgaccaggtgcgcgacctggtgagcttcgtggtgcag
actgcgcaaatgggcgggcgcaaagtggtgctgatcgagccggtcgaggcgatgaacatc
aacgcggccaacgccttgctcaaaagccttgaagagccgtccggcgataccgtgctgttg
ctggtgagccaccagtccagccgcttgttgccgaccattcgcagccgttgcgtgcagcag
gcttgcccgttgcccagcgaggacatgagcctgcaatggctggcgcaggcgttgccggaa
tgcagcgcagaagaacgaggcgagttgctgaccctggcggccggttcgcctttggcggca
gtgaagctgcaggcccagggcgtgcgcgaacagcgtgcactggtcgtggatggcgtgaag
aaactgctcaagcaggaattgtccgccacgcaactggccgaaagcgcctggaaggatatt
ccgctgttgctgttgttcgactggttctgcgactggtccagcctgatcctgcgctaccag
cttacccaggatgagcaaggcctgggcctggcggatatgcgcaaggtcgtgcaatacctg
gcgcaaaaaagtgctcaggacaaagtgctgaacatccaggactggatcctcgcccagcgc
cagaaagtcctcggcaaggccaacctcaaccgcgtgctgttgctcgaggcattgctggtg
cagtgggtcggcctgctcgggcgccgttaa
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