Pseudomonas fluorescens A506: PflA506_4141
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Entry
PflA506_4141 CDS
T02114
Symbol
fadD_2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00061
Fatty acid biosynthesis
pfc00071
Fatty acid degradation
pfc01100
Metabolic pathways
pfc01212
Fatty acid metabolism
pfc02024
Quorum sensing
pfc04146
Peroxisome
Module
pfc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PflA506_4141 (fadD_2)
00071 Fatty acid degradation
PflA506_4141 (fadD_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PflA506_4141 (fadD_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PflA506_4141 (fadD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfc01004
]
PflA506_4141 (fadD_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfc04147
]
PflA506_4141 (fadD_2)
Enzymes [BR:
pfc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PflA506_4141 (fadD_2)
Lipid biosynthesis proteins [BR:
pfc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PflA506_4141 (fadD_2)
Exosome [BR:
pfc04147
]
Exosomal proteins
Exosomal proteins of breast milk
PflA506_4141 (fadD_2)
Exosomal proteins of breast cancer cells
PflA506_4141 (fadD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AFJ58657
LinkDB
All DBs
Position
complement(4565647..4567338)
Genome browser
AA seq
563 aa
AA seq
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MNEDFWKDKYPAGIAAQINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLSPFKRVLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGHGQPVNDASPASGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTACKVIADDGTELALGETGELCVKGPQVMKGYWQ
RQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacttttggaaggataagtaccccgccgggattgctgcacagatcaatcca
gacgagtatccgaatattcaggcggtactgaagcagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgaactgtacgaattgtccggc
gcattcgccgcgtatctgcaacagcataccgacttgaagcctggcgatcgaatcgctgtg
caactgcccaacgttctgcaataccccgtcgctgtattcggtgccatccgcgccggcctg
atcgtggtcaacaccaacccgctatacaccgcgcgggagatggaacaccaattcaatgat
tcgggggccaaggccctggtttgcctggccaacatggcgcacctggctgaaaaagtcgtg
cccaagaccgccgtcaagcacgtgatcgtcaccgaagttgccgacctgctctcgccgttc
aagcgcgtgctgatcaacagcgtgatcaagtacgtgaagaaaatggtcccggcctatcat
ctgccccaggccatcaagttcaacgacgtactcgccaagggccatggccagccggtcaac
gatgccagcccggccagcggcgatgtggccgtgttgcaatacaccggcggtaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctcgtcgccaacatgttgcaatgcaag
gcgctgatgggctccaacctcaatgaaggctgcgagatcctgatcacgccgctgccgctc
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctcaacaccctgttcgtggcactgtgcaacaacgaaggtttc
cgcaagctggacttctctgcgctgaaggtcaccctatcgggcggcatggcgttgcaactg
gctgcggcggagcgttggaaggccgtgaccggctgcgcgatctgcgaaggctacggcatg
actgaaaccagcccggtggccacggtcaacccgatccagaacatccagatcggcaccatt
ggcattccggtgccttccaccgcgtgtaaagtcatcgccgacgacggtaccgagctggcg
ctgggcgaaaccggcgagctgtgtgtaaaaggtccgcaagtgatgaagggctactggcag
cgccaggatgccaccgacgagatgctcgacagcgagggctggctgaagaccggcgacatc
gcgatcatccagccagacggctacatgcgtatcgtcgaccgcaagaaggacatgattctg
gtctccggcttcaacgtctaccccaacgagctagaagacgtgctggcgggcctgccgggc
gtgctgcagtgtgcggccatcggcgtaccggatgaaaaatccggcgagcacatcaagttg
ttcatcgtggtcaagccaggggccaccctgaccaaggaccaggtgatggaacacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtggagttccgtgatgcgttgccgact
accaacgtgggcaagatcctgcggcgtgaattgcgggatgaagagctgaagaaactcggt
cttaaaaagtaa
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