Pseudomonas fluorescens A506: PflA506_4243
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Entry
PflA506_4243 CDS
T02114
Name
(GenBank) protein of unknown function, DUF853 family
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_4243
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PflA506_4243
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
ResIII
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_16
nSTAND_NTPase5
AAA_10
AAA_30
T2SSE
AAA_7
CbiA
AAA_19
nSTAND3
SRP54
AAA_6
AAA_28
Hydrolase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AFJ56195
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All DBs
Position
complement(4678819..4680297)
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AA seq
492 aa
AA seq
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MPDSTQLLIGAGLDGLPIAQSMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAANPQGKVAERIAGMPFLNYTAQAYPVTLWDIHGQSGHPLRTTISEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLRYHPELLGEDAALMTT
GSSQALLRRLAVLEQQGAEALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFADTPKALQERLEQVVRLIRSKGVG
VYFVTQSPGDLPDTVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPTFDTLSVLTEL
GTGEALVGTLQEKGTPEVVQRVLVAPPQSRIGPLTEAERKALVASSPLLGRYDKPVDRES
AYEVLMARKELGPAEQAAPAAEEPSFTDRAGAFLGTTAGKALKSAMQQAANQMGRQLVRG
LLGSLLGGSKRK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactccacacaactgcttatcggtgctggccttgacggcctgcccatcgcccag
tccatgcgcctggccaaccgtcatgggttgatcgctggcgccacgggcaccggcaagacc
gtcaccttgcagcgcctggcggaagccttcagtgatgcgggtgtggcggtgttcgctgcc
gacatcaaaggcgacctctgcggcctgggcgccgccgccaacccccagggcaaagtggcc
gagcgcatcgccggtatgcccttccttaattacacggcccaggcgtacccggtcaccctg
tgggatatccacggccaatccggtcatccgttgcgcaccaccatcagtgaaatgggcccg
ctcttgctcggcagcctgttggagctcaccgacagccagcaatcggcgctctatgcggcg
ttcaaagtggccgaccgcgaaggcctgttgctgctggacctcaaggacctcaaggcactg
ctcaatcacctgcgctatcacccggagctactgggcgaagacgccgccttgatgaccacc
ggttccagccaggccttgttgcggcgtctggcagtgctggagcagcagggcgccgaagcc
ctgtttggcgagccggccctgcaattggaggatattttgcagcccgccagtgatgggcgt
gggcgcatccacctgctggacgccagccgcttggtgcatgaagcgccgaaggtctacgcg
accttcctgttgtggctgctggcagagttgttcgaacaattgccggaacgcggcgatgcc
gacaaaccgttgctggcgttgtttttcgacgaggcgcacttgttgttcgccgatacgcca
aaagcgttgcaggagcgcctggagcaggtagtgcgcctgatccggtccaaaggcgtcggc
gtgtatttcgtcacgcaatcgccgggcgatttgccggatacggtgctggcgcaactgggc
ctgcgcatccagcacggtttgcgcgcgttcactgccaaagaacagaagtccctgcgagcg
gtggcggacggttttcgtcccaacccgacattcgataccttgtcggtgcttacagagttg
ggcactggtgaggccttggtgggaaccttgcaggaaaagggcacgccggaagtcgtccag
cgcgtactggttgctcctccgcaatcgcggatcgggccgctcaccgaagccgaacgtaaa
gcgttggttgccagttcgccgctgttggggcgctatgacaagccggtggatcgtgagtct
gcctatgaagtgctgatggcccgcaaggagcttgggcctgccgagcaggctgctccggcc
gccgaagagccgagctttaccgacagggccggtgccttcctggggaccacggcgggcaag
gcgttgaagtcagccatgcagcaggccgccaatcagatggggcgccagttggtgcgtggt
ctgctgggttcgttattgggcggcagcaaacgcaaataa
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