Pseudomonas fluorescens A506: PflA506_4498
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Entry
PflA506_4498 CDS
T02114
Name
(GenBank) diguanylate cyclase (GGDEF) domain protein, YfiN family
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PflA506_4498
Enzymes [BR:
pfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PflA506_4498
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
RELT
SMP_2
Motif
Other DBs
NCBI-ProteinID:
AFJ58622
LinkDB
All DBs
Position
complement(4950627..4951889)
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AA seq
420 aa
AA seq
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MSRDKVRPTLRSVIARGHMILALVAVTLASVSLTLLGVLALRVYAEHNLHLIARSINYTV
EAAVVFNDSAAATEALSLIASTEEVAQAEVFDINGKLLARWVRPETGMLSRVELQIAHAL
LEQPISQPILRQGQTVGSIHLVGHGGSLLRFLLSGLVGILICTALSAWVALHLSRRLLNG
ITVPLQRLAAVAHAARSERDFDRRVPSAQIAELDSLGSDFNALLGEMEAWQSHLQSENET
LAHQASHDSLTGLPNRAFFEGRLIRALRSAAKVNERVAVLFLDSDRFKDINDSFGHAAGD
AVLVAVADRVRAQLREDDLVARLGGDEFAVLLAPLHKAEDAHRIADKIIASMDMPIPLPG
DTQVSTSLSIGIAIYPEHGATPGTLLNAADAAMYQAKRLSSGGQQTAESEHPVVNVQHRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgataaagtgcggccgaccctgcgttcggtgattgcccgcgggcatatgatc
ctggcgctggtagcggtgaccctggccagtgtttccctgaccctgctcggcgtgctggcc
ctgcgggtttacgccgagcacaacctgcacctgatcgcccgctccatcaactacaccgtg
gaagcggctgtggtgttcaacgatagcgcggcggccaccgaagccctgagcctgattgcc
tccaccgaagaagtggcccaggcagaagtatttgatatcaacggcaagctgctggcgcgc
tgggttcgcccggaaaccggcatgttgtcacgggtcgagctgcaaatagcgcacgccctg
ctcgaacagcccatcagccagccgattctgcgccaggggcaaactgtcggcagcatccac
ctggtcggccacggtggcagcctgttgcgctttttgctcagcggtctggtcgggattttg
atctgcacagcgctcagcgcctgggtggcattgcacctgtcgcggcgtctattgaatggc
atcaccgtgccattgcaacgcttggccgccgtcgcccacgccgcccgcagcgaacgagac
ttcgaccgccgcgtaccctcggcgcagatcgccgagctcgacagcctgggcagcgacttc
aatgccctgctcggtgagatggaggcttggcaaagccacctgcaaagcgaaaacgaaacc
ctggcccaccaggccagccacgacagcctcaccggcctgcccaaccgcgcgttcttcgaa
ggccggctgatccgcgccttgcgcagcgccgccaaggtcaacgagcgggtggcggtgttg
ttcctcgacagcgaccgcttcaaagacatcaacgacagcttcggtcacgccgctggcgat
gccgtgctggtggccgttgccgaccgcgtgcgggcgcaactgcgcgaggacgacctggtg
gcgcgcctgggcggtgatgaattcgcggtattactggcgcccctgcacaaggccgaagac
gcccatcgcatcgccgacaaaatcattgccagcatggacatgccgatccccctgccaggt
gatacccaggtgtcgacctccctcagcatcggtattgccatttatcccgagcatggcgcc
actcccggcaccttgctcaacgccgccgacgcggcgatgtaccaggccaaacgattgtcc
tcgggcggccagcaaacggcggagtcggagcatcccgtcgtcaacgttcaacacaggagt
tga
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