Pseudomonas fluorescens A506: PflA506_4544
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Entry
PflA506_4544 CDS
T02114
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfc03016
]
PflA506_4544 (truB)
Enzymes [BR:
pfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PflA506_4544 (truB)
Transfer RNA biogenesis [BR:
pfc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PflA506_4544 (truB)
Prokaryotic type
PflA506_4544 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AFJ57544
LinkDB
All DBs
Position
complement(5008237..5009154)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtattcgtcgcaacgtcagtggcatcattctgctcgacaaaccc
attggctttacctccaatgccgcgttgcagaaggttcgctggctgctcaacgccgagaag
gccgggcataccggcagccttgatccattggccaccggtgtattgccgttgtgctttggc
gaggccaccaagttttcgcaatacctgcttgattccgacaagggttacgaaaccctgatg
caactgggcaagaccaccaccacggcggatgccgaaggtgatgttttgcaggttcgcgac
gtgaccgttggtcgtgcggatatcgaagctgccttacccgcttttcgtgggcaaatcagt
cagataccgccgatgtactcggcactcaagcgcgatggccagccactttacaagctggca
cgtgcgggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgcttgtgaaggcgacactgcccgtttggccgtggactgcagcaaaggcacctatatc
cgtaccctggtggaagatattggtgaaaagctcggttgcggcgcgtacgttgcggaactg
cgacgcacccaggccgggcctttcagcctggcccagacggtcacgctggaagagttggaa
gcggtacacgccgagggcggcaatgaagcggttgatcgcttcctcatgccatcggacagc
ggtttgctcgattggccgctgctgcacttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgcgccccggatgccccgaagttcggcatggtgcgagtacaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgg
ctgattcggtcagaatga
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