Pseudomonas fluorescens A506: PflA506_4704
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Entry
PflA506_4704 CDS
T02114
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03030
DNA replication
pfc03430
Mismatch repair
pfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PflA506_4704 (holA)
03430 Mismatch repair
PflA506_4704 (holA)
03440 Homologous recombination
PflA506_4704 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_4704 (holA)
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_4704 (holA)
Enzymes [BR:
pfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PflA506_4704 (holA)
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PflA506_4704 (holA)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PflA506_4704 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AFJ56854
LinkDB
All DBs
Position
5191701..5192738
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGGLAPVYIVSGDDPLLCQEAADAIRTAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLVSLPKLDGSA
QKTKWGKALVEGPQTQFIQIWPVDSNQLPQWIRQRLSQSGLAATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE
GVEPPVILWALARELRVLANIALQYSQGTPLDKCFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgcccccgcccaactcgccaaacacctgcaaggtggccttgcgcctgtgtac
atcgtcagcggcgacgacccgctactgtgccaggaagcggccgacgctatccgcaccgcc
gcacgccagcaaggtttcgatgaacgccaggtgttcagtgctgacgccagtttcgactgg
ggcacgctgctgcaagctggcgcgagcatgtcgctgtttgccgaaaaacgcctgctggaa
ctgcgcctgccctcgggcaagccgggcgataaaggcgcggcggccctgatggaatactgc
tcgcgccccgccgaagacaccgtgctgctggtcagcctgcccaagcttgacggcagcgcg
cagaaaaccaagtggggcaaggccctggttgaaggtccacagactcagttcatccagatc
tggccggtggacagcaaccagttgccgcagtggattcgtcagcgcctgtcgcaatcaggg
ctggcggcgacacaggatgccgtggaactgatcgccgctcgggtcgagggcaacctgctt
gccgccgcccaggagatcgaaaagctcaagttgatggctgaagacgggcagatcaccgtc
gaaaccgtgcaaggcgcagtggccgatagcgcacgctttgatgtgttcggcctggtggac
gccatcctcaacggcgagcccgcccacgccctgcgcatgctcgaaggcctgcgtggcgaa
ggagtggaaccgccggtgattctgtgggcactggcccgtgagctgcgggtgctggcgaac
attgccctgcaatacagccaaggcacaccgctggacaaatgcttcagccaggccaggccg
ccggtatgggacaaacgcaaacccctgatgagcaaagccctgcaacggcactcggcgcaa
cgctgggcgcaactgttactggaagcgcagcgcatcgacgcacagatcaaaggccaggcg
gccggctcgccgtggatgagcctgagccgcttgtcgctgttgatggctggccagcgcctg
gcgttgcctgccgaataa
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