Pseudomonas fluorescens A506: PflA506_4929
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Entry
PflA506_4929 CDS
T02114
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03030
DNA replication
pfc03430
Mismatch repair
pfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PflA506_4929
03430 Mismatch repair
PflA506_4929
03440 Homologous recombination
PflA506_4929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_4929
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_4929
Enzymes [BR:
pfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PflA506_4929
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PflA506_4929
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PflA506_4929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFJ58463
LinkDB
All DBs
Position
5411355..5412062
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFGWLRAKKPGLNAAQQQRLEHLPKPAELGNGPLRSQRWVVVDLETSGLNLHRDQVLS
IGAVVIEDGAVDFSQLFERTLQRTDTKLSPSVLIHGLGPSAIAAGSDPAEALLDFMAFVG
DSPLLAFHAPFDQHMLCRALKDSLGYRLAHPFLDVADLAPLLCPEAHIREAGLDDWLNHF
RLQAGERHHASADALATAELMLILFSRARQQQIDTPQTLQERLAQWKRRKQSPSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggctggctgcgcgcgaaaaagcccgggctcaacgctgcgcaacagcag
cgcctggagcatttacccaagcccgccgaactgggcaacggcccattgcgcagccagcgc
tgggtagtggtggacctggaaaccagcggcctgaaccttcaccgcgaccaggtgctgtcc
atcggcgccgtggtcatcgaagacggtgcggtggatttctcccaactgttcgaacgtacc
ctgcagcgcaccgacaccaagctcagccccagtgtgctgatccacgggctggggcccagt
gcaattgccgccggcagcgacccggccgaggcgttgctggatttcatggcgttcgtgggc
gacagccctctgctggcttttcatgcgccgtttgatcaacacatgctgtgccgggcgctc
aaggacagcctggggtatcgcctggcccatccattcctggatgtggcagacctggctccg
ctgttgtgccctgaggcgcatatccgcgaggccgggctggatgattggctcaaccacttc
aggctacaggctggcgaacgccaccatgccagcgccgatgcactggcgacggcagagctg
atgctgatcctgttcagccgtgcgcggcagcaacagatagacacgccccagactctgcaa
gagcgtttggcccaatggaaacggcgcaaacagtccccttccctttaa
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