Pseudomonas fluorescens A506: PflA506_4930
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Entry
PflA506_4930 CDS
T02114
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PflA506_4930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfc03021
]
PflA506_4930
Transcription machinery [BR:
pfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PflA506_4930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_24
HTH_29
HTH_17
HTH_31
Sigma70_r3
MerR
Motif
Other DBs
NCBI-ProteinID:
AFJ54818
LinkDB
All DBs
Position
5412217..5412735
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQTPRSELVGALYRDHRGWLLAWLRRNVGCPSRAEDLSQDTFMRLLGRDELREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLIELMLIPESEQPSPEAQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcggtccagaccccacgcagtgagcttgttggtgcgttatatcgcgaccaccgt
ggctggctgttggcttggctgcgacgcaacgtggggtgcccaagccgcgccgaagacctg
agccaggacaccttcatgcgcctgctgggccgtgacgagttgcgcgagccccgcgaaccg
cgggcgttcctggtggccatcgccaagggtttgctgttcgactatttccgacgtgcggcc
ctggaacaggcctacctcatcgaattgatgctgatcccggaaagcgaacagccttcgccg
gaagcccagcaactgatcctcgaagacctcaaggccatcgaccgcctgctcggcaaactg
tcgagcaaggcccgcgccgcgttcctctataaccgcctcgacggcctgggccatgccgaa
atcgcccagcgcctgggcgtgtcggtgccccgcgtgcgccaatacctggcccagggcatt
cgccagtgctacatcgcactgtatggcgagccgtcgtga
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