Pseudomonas fluorescens A506: PflA506_4946
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Entry
PflA506_4946 CDS
T02114
Symbol
soxA
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00260
Glycine, serine and threonine metabolism
pfc01100
Metabolic pathways
Module
pfc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PflA506_4946 (soxA)
Enzymes [BR:
pfc01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PflA506_4946 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PflA506_4946 (soxA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
NAD_binding_8
DAO
Pyr_redox_3
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFJ58476
LinkDB
All DBs
Position
complement(5428720..5431737)
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AA seq
1005 aa
AA seq
DB search
MSQINRLSNGGRIDRNKVLTFTFNGQSYKGFEGDTLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDNFNRHCDVLVVGAGP
AGLAAALAAARSGARVIIADEQEEFGGSLLDSRESLDGKPATEWVAGVIAELKALPDVVL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGVVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLLLSTNNDHAYRVALDWFDAGLTVVAVADARHN
PRGALVEEARAKGIRILTGSAVIEARGSKHVTGARVAAIDVKAHKVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPTWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFAPVEGTLPKALSRLEEPTLALFQVPHEKATARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALQAWHVKNGAEFEDVGQWKRPWYFPRNGEDLHAAVKRECLA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREERKQLVGLKPIDPNVWLPEGAQLVFDPKQTIPMKMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRIGERVFSPQADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccaacggtggccgcatcgaccgtaataaagtcctgacg
tttacgttcaacggtcagagctacaagggctttgaaggcgacaccctggctgccgccctg
ctggccaacggtgtcgacatcattggccgcagcttcaagtattcgcgcccacggggcatc
tttgccgccggcgccgaagagccgaacgcggtgctgcagatcggcgccaccgaagccact
cagatccccaacgtgcgcgccacccaacaggcgctgtaccagggcttggtcgccaccagc
accaacggctggccgagcgtgaacaacgacatgatggggattctcggcaaggtcggcggt
aagctgatgccgccgggtttctactacaaaacgttcatgtacccgcaatcgttctggatg
acctacgagaagtacatccgcaaggcggcgggccttggccgctcgcccaccgagaacgac
ccggacacctacgacaacttcaaccgtcattgcgacgtgctggtcgtgggcgcaggccct
gcgggccttgcggctgcgctggccgctgcgcgcagcggtgctcgggtgatcatcgccgac
gagcaggaagagttcggtggttcgctgctcgattcccgcgaaagcctcgacggcaagccc
gccactgaatgggttgccggcgtcattgccgaattgaaagccctgccggacgtggtgctg
ctgccccgcgccaccgtcaacggttaccacgaccacaactttctgaccattcacgagcgt
ctgaccgaccacctgggagaccgtgcgccgattggcgtggtgcgtcagcgtattcaccgc
gtacgcgccaagcgtgtggtgctggccaccggtgcgtgcgagcgtccgctggtgtacggc
aacaacgatgtgccgggcaatatgctcgcgggtgcggtgtctacctacgtgcgtcgctac
ggcgtggcaccgggtaaaaagctgctgctgtcgaccaacaacgatcatgcctaccgcgtt
gcgctggattggttcgatgcgggcctcaccgttgtcgcggtggccgatgcgcgccacaac
ccacgcggggcactggttgaagaagctcgcgccaaaggcattcgcatcctcaccggcagc
gccgtgatcgaggcccgtggcagtaagcacgtgaccggtgcccgcgtggcagccatcgac
gtcaaggcgcataaagtcaccagccccggcgagtggctggactgcgacctggtcgccagc
tccggcggttacagcccggtggtgcacctggcctcgcacctgggcggcaaaccgacctgg
cgtgaagatatcctcgggtttgtacccggtgaagcaccgcaaaaacgcgtgtgcgtgggc
ggcatcaacggtgtctacggccttggcgattccctcgccgatggctttgaaggcggcgtg
cgtgcagccagcgaagccggttttgccccggttgaaggcacgctgccaaaagccttgagc
cgtctggaagaaccgaccctggcgctgttccaggtgccccacgaaaaagccactgcacgg
gcgccgaagcaatttgtcgaccttcagaatgacgtcaccgcggccgccatcgaactcgcg
acccgcgaaggtttcgagtcggtggaacacgtcaaacgctacaccgcgctgggcttcggc
actgaccagggcaagctgggtaacgtcaacggcctggccatcgccgcccgttcgttgaac
gtgaccatcccgcagatgggcaccaccatgttccgtcccaactacacgccggtgacgttc
ggcgccgtagcgggccgtcactgtgggcatatcttcgagccggtacgctacaccgccctg
caggcctggcacgtgaagaacggcgccgagtttgaggacgtcggccagtggaaacgccca
tggtatttcccacgcaacggtgaagacctgcacgccgcggtgaagcgcgaatgcctggcg
gtgcgtgacagcgtcggcctgctggacgcgtccaccctcggcaagatcgacattcagggc
ccggatgcccgcgagttcctcaaccgtatctacaccaacgcctggaccaagctcgacgtg
ggcaaggcgcgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtc
actgcctgtctggccgacaaccacttcctgatgaccaccaccaccggcggcgccgcccgc
gtgctgcagtggctggaaatctaccagcagaccgaatggccggacctcaaggtgtacttc
acctcggtcaccgaccattgggcaaccatgaccctgtcgggccccaacagccgcaagctg
ctcagtgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaag
gaaggccttgtgggtggcgtgccggcacgggtgttccgtatctcgtttaccggtgagttg
tcgtatgaggtcaacgtgcaggccgactacgccatgggcgtgctggaaaaaatcgtcgag
gccggcaaacagtacaacctgaccccgtacggcaccgagaccatgcacgtactgcgcgcc
gagaagggcttcatcatcgtcgggcaagacaccgacggctcgatgaccccggacgacctg
aacatgggctggtgcgttggccggaccaagccgttctcgtggatcggctggcgcgggatg
aaccgtgaagactgcgtgcgtgaagagcgcaagcagttggtggggctcaagccgatcgac
ccgaacgtgtggctgccggaaggcgcgcagttggtgttcgatccgaagcagacgattccg
atgaagatggtgggtcacgttacctcaagttatgcgcataactccctgggctattcgttt
gccatgggtgtggtgaagggcggcttgaagcgcatcggtgagcgagtgttctcgccgcaa
gcggatggcagcgtgatcgaggccgagattgtgtcttcggtgttctttgacccgaaaggt
gatcggcagaacatctga
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