Pseudomonas fluorescens A506: PflA506_4987
Help
Entry
PflA506_4987 CDS
T02114
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfc03009
]
PflA506_4987 (dbpA)
Enzymes [BR:
pfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PflA506_4987 (dbpA)
Ribosome biogenesis [BR:
pfc03009
]
Prokaryotic type
rRNA helicases
PflA506_4987 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
AFJ56422
LinkDB
All DBs
Position
5477736..5479121
Genome browser
AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYVEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPPR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDDQIEQRFYEISPEERMDAVTKVLA
HFRPASCVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
QLQKSPLNWDQLDNLKPQSGGPLLPQMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAFVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccatcgccaccgcttttaatactttgcccctgtccgccgccatgctggctaac
ctcgactcgctgggttacgtcgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaagggctggacctcattgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcttgttgaacccgatcaacccgcgctacttcggttgccaggcgctggtgatg
tgcccgacccgtgagctggccgaccaggtcgccaaagaaatccgccgcctggcccgtgcc
gaagacaacatcaaggtactgaccctgtgcggcggcgtgtccctcggcccgcagatcgcc
tccctggagcatggcgcccacgttatcgtcggcaccccgggacgcatccagcagcacctg
cgtaaaggttctctggtgctggacggcttgaacaccctgattctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcagcaagaccccaccgcgc
cgccagaccctgctgttctcggccacctacccggtgagcatcaagcaactggcctccaag
ttcatgcgtgcgcctcagcaagtgaaagccgaagcgttccactccgacgaccagatcgaa
caacgcttctacgagatctccccggaagagcgcatggacgccgtgaccaaggtgctggcg
cacttccgcccggcttcgtgcgtggcgttctgctttaccaagcagcaagtgcaggaaacc
gtcgaccacctgacgtccaagggcatttccgctgttggcctgcatggtgacctggaacag
cgcgaccgtgaccaggtactggcgatgtttgccaaccgcagcacctcggtgctggtggcc
accgacgtcgccgcccgtggcctggacatcgacgccctggacatggtgatcaacgtcgaa
ctggcccgcgactcggaaattcacatccaccgtgtaggccgtaccggccgtgccggtgag
actggtatcgccatcagcctggtggcgccgtccgaagcccaccgcgcccaggccattgag
caactgcagaagtcgccgctgaactgggaccaactggacaacctcaagccgcaaagcggt
ggcccgctgttgccgcagatgagcaccctgtgcatcgctgccgggcgtaaggacaaggtt
cgcccaggcgacatcctcggcgcattgaccggtgaagccggcattccgggtgcccaggtc
ggcaagatcgctatctttgatttccaggccttcgtggccgtggaacgcggcatcgccaag
caggcgttgcagcgtttgaatgacggcaagatcaaaggccgttcgctgcgcgtgcgcatt
ttgtaa
DBGET
integrated database retrieval system
