Pseudomonas fluorescens A506: PflA506_5075
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Entry
PflA506_5075 CDS
T02114
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfc03021
]
PflA506_5075 (rpoH)
Transcription machinery [BR:
pfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PflA506_5075 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AFJ59451
LinkDB
All DBs
Position
complement(5564844..5565698)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgccttggtcccgggtgcgaacctggaagcctat
gtgcacacggtcaacagcattccattgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctatagcggctacggtctggcccaggccgacctgatt
caggaaggcaacgtaggcctgatgaaggctgtgaagcgtttcaaccctgaaatgggcgtg
cgcctggtgtcgtttgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaaaaaacgcctggcgtggctgaacaacgaagaagtccaccgcgtggccgaa
agcctcggtgtggagccccgtgaagtgcgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccagccgccgaagcggatgacgacagcgccttccaatcgccggccaac
tatctggaagaccaccggtacgatccggcgcgtcaactggaggacgccgactggagcgac
aactccaaccacaacctgcacgaagcgctggaagtgctggacgaccgcagccgtgacatt
ctctaccagcgttggctggcagaagaaaaagccacgctgcacgacctggcgcaaaagtac
aacgtgtcggcagagcggattcgtcagcttgagaaaagcgcgatgaacaagctgaagttg
tcgatcgccgcttaa
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