Pseudomonas fluorescens A506: PflA506_5230
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Entry
PflA506_5230 CDS
T02114
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00300
Lysine biosynthesis
pfc00470
D-Amino acid metabolism
pfc01100
Metabolic pathways
pfc01110
Biosynthesis of secondary metabolites
pfc01120
Microbial metabolism in diverse environments
pfc01230
Biosynthesis of amino acids
Module
pfc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PflA506_5230 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PflA506_5230 (lysA)
Enzymes [BR:
pfc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PflA506_5230 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFJ54715
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Position
5725884..5727131
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKSREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVTPRTSEARAYDIVGPICETGDFLAKDRELTLEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggccttgtccgcg
attgcccagcgcttcggcaccccgacctatgtgtactcgcgtgcgcatatcgaagcccaa
taccgctcgttcaccgacgccctcgacggcgtgccgcacctggtgtgctacgcagtcaag
gccaactccaacctgggtgtactcaatgtcctggcgcgtcttggcgctggttttgacatc
gtgtcccgtggcgagctggaacgcgtactggccgccggcggccaggcggacaaaatcgtc
ttctccggcgtcggcaagagccgcgaagacatgcgccgcgccctggaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcaagtcgttgccgccgaaatg
ggcgttcgcgcgccgatctccctgcgcgtcaacccggatgtcgacgccggcacccacccg
tacatctccaccggtctcaaagagaacaagttcggcattgccatcgccgacgccgaggac
gtgtacatccgcgcagcccaactgccgaacctggaagtgctgggcgtcgactgccatatc
ggctcgcaactgaccaccctgccaccgttcctggatgccctcgaccgcctgctggccttg
atcgaccgcctcggcgagtgcggcatctacctgcaccacatcgacctcggtggtggcgtg
ggcgtgcgttatcgcgatgaagagccgccactgattgccgactatatccaggccgtgcgc
gaacgcatcgaaggccgcgacctgacgctgatgttcgagccgggccgctacatcgtcgcc
aacgctggcgtgttgctgacccaggtcgagtacctcaagcataccgaacacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gatgtcaccgccgtgacgccgcgcacaagcgaagcccgcgcctatgacatcgtcgggccc
atctgcgagaccggcgacttcctcgccaaggatcgtgagttgacgcttgaggaaggtgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcatttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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