Pseudomonas fluorescens A506: PflA506_5295
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Entry
PflA506_5295 CDS
T02114
Symbol
tssM1
Name
(GenBank) type VI secretion protein TssM1
KO
K11891
type VI secretion system protein ImpL
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02025
Biofilm formation - Pseudomonas aeruginosa
pfc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PflA506_5295 (tssM1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PflA506_5295 (tssM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfc02044
]
PflA506_5295 (tssM1)
Secretion system [BR:
pfc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PflA506_5295 (tssM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AFJ56000
LinkDB
All DBs
Position
complement(5794185..5797685)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIVLVFALWVAYRVFRI
IQARRQAAEVMRSLAAETPVDPNSVATAEELSTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRARRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDSARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSGLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQREVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRLNEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVARETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGEAQPTANAPAPADDPV
TAHFAELNSIVSKNEGEPAAIDGLLSDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgattgcc
ctgagcctgatcatctggtttgttggcccgctgctggacgtgctggtgcccgaagggcgc
cgttgggcgctgatcgtgctggtgtttgcgctgtgggtggcctaccgcgtgttccgcatt
atccaggcccgtcgccaggccgccgaagtgatgcgcagcctggccgcagaaaccccggtc
gaccccaacagcgttgcgaccgccgaagagctgtccacgctgcgccagcgcatggacgaa
gccctggcactgctgaaaaaggccaagctgggcggcgatgagcgccgcaacctctacgag
ttgccgtggtacgtgatcatcggcccgccgggctcgggcaagacgaccgcgctggtcaat
tccgggctgcatttcccactggcggcgcaattgggcgccggtgcggtgcggggcgtgggg
gggacgcgcaactgcgactggtggtttaccgaccaggccgtattgctcgacaccgctggc
cgctataccacccaggacagcaactccacggtggacaaagccgcctggctgggctttctc
gacttgctgaaaaagcagcgtgcgcgccggcctatcgacggtgcctttatcgccatcagc
ctctcggatctgctgctgggcaccgacgccgagcgcgcagcccatgctgccgcgattcgc
ctgcgcatccaggagctgtatacgcaactgggcgtgcgtttccccatctacctgatgctc
accaagctagacctggtgccgggcttcatggagttcttcgacaacctgagcaaggaagag
cgcgctcaggtgtggggcatgacctttgccctggacgacggcaaaaacagcgacagcccg
ctggcgcacctgcaaagcgaattcgccggcctggagcagcgcctcaacgaacgcctggtc
gagcgcttgcaacaggaacgcgactcggcacgacgcgacctgatctacggcttcccgcag
cagttcggcgcgttgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gcctttgaagagcgcgtgttgctgcgtggcgtgtacttcaccagcggcacccaggaaggc
agcccgattgaccgcctgatcggtgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagcggcaccgggcgcagttacttcatcgaaaaactgttcaccgccgtg
gcctttgccgagcgcggcctggtgggggtgaacccgaaagtcgagcggcgccgcaagtgg
atcgcccgtggcgtactggcggccaccgtcgcgctggtggtggtggtcagcggcctgtgg
tgggtgagctatcgcgccaaccaggcatatatcgcccaggtcgatcagaaggtcgcgccc
ctgggccagaccgtacagaacctgagcccggcacagcgggaagtgctcgccgtgctgccg
ttgctcaatgcggtgaagaacctggcgggggattcgccgagctggtccgaagggctgggg
ctgtaccagggcgatatgctcgaagccgagtccgccagcgtgtaccgcaaactgttgatc
gccgtgttcgcgccacgcctggtgacgcgtatcgaagagcaactgcacggcggcggtaac
tcggactttctctacgagggcctcaaggcttacctgatgctcgccgacaccgagcattac
gacccggacttcatcaaggcctggatcgccctggactgggaccgcaacctgccccgcgac
ctgccggccgaccagcgtcaggccctggccgggcacttgcaggcgctgttcgaacgccac
ccgccgagcgcacgcctggacccacggctgatcgacgatttgcgtcggcagttgcagcag
ttgccggtagcccagcgcgtgtacgaccgcgtcaagcgccagaaactgcccgaaggtatc
ccggactttcgcctcaacgaagccgccggtcgcgatgccgcgctagtgttcagccgcaag
agcggcaagccgttgggtgagccgttgagtggtttctttaccgccaaaggctatcgccag
gcgttcttgctcagcagcttgaaccagaccggcaccctggccgaagagcaatgggtgctg
ggccatgaacaggccgaccagcagaacgtggtgagcctggccgccgacgtgcgccgtttg
tacttccaggattaccagcgccagtgggacgcgttgctcgccgacatcgactttgtgccg
atcaccagcgtggcacaggccgccgatgtgctgcgggtgatttccggtcccacctcgccg
ctgaaaaagctgctggtggcggttgccagggaaaccgacctgcaagccgaagaacgccaa
ctggccgccaaaggcgtgccggtggaaggcggcgtggacaagctcaaggagcgcctcggc
agtttgctgggcgaggcgcaaccgacggcgaatgcaccggcaccggcggatgatcccgtg
accgcgcactttgccgaactcaacagcatcgtcagcaaaaacgaaggtgaaccggcggcc
atcgacggcctgctgtcggacatgaatgcactgtatgtgcaggtcagtgccatggtcggt
gccagcggcgatgccttgctcggtgaggccaagaaccaggcggcggctgcggccacgcgg
gtcagcctgaacgccgagcgtcagccgccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgtaaccagctgaacgcggcctgggtc
agtgaggtggtcaacgtgtatcgccagtcgttggccgggcgttaccctatgtcgccgggc
agtgcgcgggacgccaccctggatgacttcggccagttcttcggcgtgggcggggtgatg
gacaactacttccgcaaatacctgcagccctatgtggacacgtcggcacagacctggcgc
tggcaaccgggggcggcgcagaagctgggaattgctcctggcgtgctgcaaaccttccag
cgggcggcgacgattcgggacgcgttcttccgctccggtggcacccaacccatcgtgcgt
ttcgaactcaagccggtgtcgatggaccctaccatcacccagttcctgcttgacctggac
ggccagcaattgagctacgaccacggcccgagccggccggtggcgatgcaatggccgaac
ccgggcagcattggcgtggtgcgtatttccatcatgcccccgtcggccagtggtcgctcc
ggcatcactctggacggcccgtgggcctggttccgtctgctggagcaatcagacctcacc
gcaggcaactcgccggatcgtttcaacctgcgcctgcgagtcgatggcgcgagcatcgcc
tacgagttgcgcgccaacagtgccttcaacccgttcaagagccgcgtgctcagtggcttc
agcctgccggagcggctatga
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