Pseudomonas fluorescens A506: PflA506_5307
Help
Entry
PflA506_5307 CDS
T02114
Symbol
clpV1
Name
(GenBank) type VI secretion ATPase ClpV1
KO
K11907
type VI secretion system protein VasG
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02025
Biofilm formation - Pseudomonas aeruginosa
pfc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PflA506_5307 (clpV1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PflA506_5307 (clpV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfc02044
]
PflA506_5307 (clpV1)
Secretion system [BR:
pfc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PflA506_5307 (clpV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
AAA_25
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
Clp_N
AAA_14
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AFJ55787
LinkDB
All DBs
Position
5809787..5812447
Genome browser
AA seq
886 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSGEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGVPGEASGAM
APSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEALL
TAERERLATLESRWAEEKALVDELLATRATLREKAGVVDSGNDELRAQLVDLQQRLTALQ
GETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIA
KRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAH
TVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMED
GEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGRL
VTIPYYPLSDEMLKAITRLQLNRIKKRVENTHKVAFEYDDAVVVLIVSRCTETESGGRMI
DTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFSDTE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaagcc
atcgaagccgccaccgtgttctgcaaattacggggcaatccgtatgtggaactggcccac
tggtttcaccagttgttgcaactgcaggactccgacctgcaccgcatcatccgccagttc
aacgtggagccggcgcgcctggcccgcgacctcaccgaagccctggaccgcctgccgcgc
ggctccacgtcgatcaccgacctgtcctcccatgtggaagaggccgtagaacgcggctgg
gtgtatggcagcctgatgtttggcgaaagccaggtgcgcaccggttatctggtgctgggc
atcttgaagacaccgagcctgcgccatgcgctgctgggcctgtccggcgagttcgacaag
atcaaggccgaggccttgagcgagcgctttgacgaatacgtcggtgactcgccggaaaat
gccttgagcgccagcgacggtttcaatgccggtgtgccaggcgaggccagcggtgccatg
gcgcccagcgcgatgggcaagcaggaagcgctcaagcgtttcactgtggacctgaccgaa
caggcccgcagcggcaagctcgacccaatcgtgggccgtgacgaggagatccgacaactg
gtggacatcctcatgcgtcggcgccagaacaacccgatccttaccggtgaagccggggtg
ggcaagaccgccgtggtcgaaggtttcgccctgcgcatcgtcgccggtgacgtgccgccc
gccttgaaagacgtggagctgcgcagcctcgacgtgggcttgctgcaagccggcgccagc
atgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtgcaggcctcgccc
aagccgatcatcctgtttatcgacgaagcccataccctggtgggtgccggtggcgctgcc
ggcaccggtgacgcagccaacctgctcaagcctgccctggcccgtggcaccttgcgtacc
gtggctgccaccacctgggccgagtacaaaaagcacatcgagaaagacccggccctgacc
cgccgcttccaagtggtgcaggttgccgaaccgtcggaagacaaggccctgctgatgatg
cgcggcgtggcttccaccatggaaaaacaccatcaggtgcagatcctcgacgaagctctt
gaagcctcggtgaagctctcccaccgctatattccggcgcgccagttgccggacaagtcc
gtaagcctgctggacaccgcctgcgcccgcgtcgctatcagcttgcacgcggtaccagca
gaagtggacgacagccgtcggcgtatcgaggccctggaaaccgagttgcaaatcatcgcc
cgtgagcatgcgatcggcattgccattggtgcgcgtcaaaccaatagcgaagcgctgctg
accgccgagcgtgagcgtctggccacgctggaaagccgctgggctgaagagaaagccttg
gtggatgaactgctcgccacccgcgcaaccttgcgcgagaaagccggtgtggtggacagc
ggcaacgatgagttgcgtgcgcaattggtcgacctgcaacagcgcctcaccgccctgcaa
ggcgaaaccccgttgatcctgccgaccgtggattaccaggccgtggcctcggtggtcgcc
gactggaccggcatcccggtgggccgcatggcgcgcaatgagctggaaactgtgctcaac
ctcgaccagcacctgaagaaacgcatcatcggccaggaccatgccctgcagatgatcgcc
aagcgcatccagacctcccgcgccggcctcgacaacccgagcaagccgattggcgtgttc
atgctggccggcacctcgggtgtgggcaagaccgaaaccgccctggccctggccgaagcc
atgtatggcggtgagcagaacgtcatcaccatcaacatgagcgagttccaggaagcccac
accgtgtccaccctcaagggcgcgccaccgggctatatcggctacggcgaaggcggtgtg
ctgaccgaagcggtacggcgcaaaccctacagcgtggtgctgctcgatgaggtggagaaa
gctcacccggacgtgcatgagatcttcttccaggtgttcgacaagggcgtgatggaggac
ggcgagggccgggtgatcgacttcaagaacaccttgatcctgctgaccaccaatgccggg
acagagctgatatcccaggtgtgcaaagacccggcgaacatccccgagcccgaggaaatc
gccaaggccctgcgccagccactgctggagattttcccgccggccttgctcggtcgcctg
gtgaccatcccttactacccgctgagcgacgagatgctcaaagcgatcacgcgcctgcaa
ctgaaccgaatcaagaagcgcgtggagaacacccataaagtcgcgttcgagtatgacgac
gcagtggtcgtcctgatcgtctcgcgctgcaccgagaccgaaagcggcgggcgcatgatc
gacaccatcctgaccaacagcctgctgccggacatgagccgcgagttcctcacgcgcatg
ttggaaggcaaggcactggcgggggtgcggatcagtagtcgggataatgaactgcactac
gacttcagcgacaccgaataa
DBGET
integrated database retrieval system
