KEGG   Plasmodium falciparum Dd2: PFDG_00990
Entry
PFDG_00990        CDS       T01051                                 
Name
(GenBank) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFDG_00990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfd03019]
    PFDG_00990
Messenger RNA biogenesis [BR:pfd03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PFDG_00990
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     PFDG_00990
SSDB
Motif
Pfam: RNase_PH RNase_PH_C MsyB
Other DBs
NCBI-ProteinID: KOB85490
UniProt: A0A0L7LYY7
LinkDB
AA seq 278 aa
MSSLNYIEDSINCNIRIDGRTLLTYRSIEINKNILVSGDGSSSVINEENNVICGIKLSLI
TPDVDTYDEGNVNLQIDCPASVAANRIKKDHLQTMTTIIYNLCIKNNINKKILCILPGKF
AWSVDINVMVLNAGGGLLDIISIAIYVALKDTFFPIVKPKKEIEEENTFHEISNKDYQLE
IVENEHVNFPYENIPICISIGEINNKYIYDMSKVEEELVQNIFVVAITSKGKCVAFHKLY
GISMEISSILNITENSSKISHTLFDKIHQALDKIHANM
NT seq 837 nt   +upstreamnt  +downstreamnt
atgagctcgttaaattatattgaagacagcattaactgcaatataagaatagatggtcga
accttattaacgtacagatctatagaaataaataaaaacattcttgtgtcaggtgatggg
agtagtagtgtaataaatgaagaaaataatgtaatttgtggaattaagctttctttaata
actcctgatgttgatacatatgatgaaggtaatgtaaacttacaaattgattgtccagca
tctgttgctgctaatagaataaaaaaagatcatttacaaacaatgacaacaattatttat
aatttatgtataaaaaataatataaataaaaaaatattatgtatcctcccaggtaaattt
gcctggagtgttgatataaatgttatggttcttaatgctggaggaggcctattagatatt
attagcatagccatatatgtagctttaaaagatacgtttttccctattgttaaaccaaaa
aaagaaattgaagaagaaaatactttccatgaaatttcaaataaagattatcagctagaa
attgttgaaaatgaacatgtaaattttccatatgaaaatatacctatctgtatatctatt
ggggaaatcaataataaatatatttatgatatgtccaaagtcgaagaagaacttgttcaa
aatattttcgttgtagctattacgtctaaagggaaatgtgtagcattccataaattatat
ggtatatccatggaaatatcatccattttaaatattactgaaaattcctctaaaatttct
catacgctttttgataaaattcatcaagcattggataaaatacacgcaaatatgtag

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