Plasmodium falciparum Dd2: PFDG_01152
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Entry
PFDG_01152 CDS
T01051
Name
(Broad) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pfd
Plasmodium falciparum Dd2
Pathway
pfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFDG_01152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfd03041
]
PFDG_01152
03009 Ribosome biogenesis [BR:
pfd03009
]
PFDG_01152
Enzymes [BR:
pfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PFDG_01152
Spliceosome [BR:
pfd03041
]
Complex A
U2 snRNP components
U2 related factors
PFDG_01152
Complex B
PFDG_01152
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PFDG_01152
Ribosome biogenesis [BR:
pfd03009
]
Eukaryotic type
90S particles
Helicases
PFDG_01152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
Flavi_DEAD
nSTAND3
AAA_19
ResIII
T2SSE
SRP54
ATPase
Helicase_RecD
AAA_7
AAA_30
Roc
TsaE
PhoH
TniB
Motif
LinkDB
All DBs
AA seq
820 aa
AA seq
DB search
MSEEEDNQSNNISLERNTVSEECTYSTNERTKKKKLDNIIDEENNKKIKLNNNCYEQDDD
EQTLFDNNKINEYNILDNKNVDSNITNNINLNKCNVKVENNILNNITNVQNDILSKENNN
NNNYNNVQPTTHTSVVTNNEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAKKNFLKLL
KKNNVLIIVGDTGSGKTTQISQFVLESKYTEKKSIAVTQPRRVAAMSVAARVSEELDVEL
GTYVGYTIRFEDKSSNKTIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLATDILF
GVIKNIQEKRNDLKLIVMSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAEKDYVK
VVIRTVYDIHINEEEGDILVFLTGEEEIEMTKKEIERVVSRNMNAGQLVVLPLYSSLPPA
QQQKIFEPPPKPRFKGDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIE
SLLIAPISKASAEQRAGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNL
KKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDPQLAKV
LIESPNYSCSSEILTIAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLNVFHAY
VKHALVDTNESKKFCFEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPEYYINI
RKALLSGFYQQVAYKTTKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSKNFIRT
VTKIEGKWLLEIAPNYYNLEDLPNSEAKNDLKMLHKKLNH
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaggaagataatcaatccaataatatttcgctagaacgaaatactgtatca
gaagaatgtacatatagtacgaatgaacgtaccaaaaaaaaaaaactagataatataata
gatgaggaaaataataagaagataaaattaaataataattgttatgaacaagacgatgac
gaacaaaccttatttgataataataagataaatgaatataatattcttgataataaaaat
gtggattctaatataactaataatataaatctaaataagtgcaatgttaaggtagaaaat
aatattttaaataatattacaaatgtacaaaatgatatattatctaaagaaaataataat
aataataattataataatgttcaacctactactcatacaagtgtcgtcactaataatgag
gacgattcaatgattaacaaattgaccaatcaaaaatatagtcagagatatctacaactt
ttagaagagaaaaaaaagttacccgcatggagtgcaaaaaagaactttttaaaattgctc
aaaaaaaataatgtgctaattatcgttggagatacaggtagtggaaaaacaacacaaata
tctcaattcgttttagaatcaaaatatacggaaaagaaatctatagctgttacacaacca
agaagggtagcagctatgagcgtagctgcacgagtatccgaagaattagatgttgaatta
ggtacttatgttggttataccataagatttgaagataaatctagtaataaaactataata
aaatatttaacagatggtatgttattaagagaatctatgagtgatcctctgttaacaaaa
tataatactataatattagatgaagcacatgaaaggacattagctacagatatattattt
ggcgtcataaaaaatattcaagaaaaaagaaatgatttaaaattaatagtaatgtctgca
acattagatgcagaaaagtttcaaaaattttttaataattcaaaaattttaaatatacca
ggaagattatttcctgtggaaatattttataccttacaagctgaaaaggattatgtaaag
gttgtaattaggacagtatatgatatacatataaatgaagaagaaggagatattttggtt
tttttaacaggtgaagaagaaattgaaatgacgaaaaaagaaattgaaagagttgtttca
agaaatatgaatgctggtcaattggttgtacttcctttatattcatctttaccacctgca
caacagcaaaaaatatttgaaccaccaccaaaacctagatttaaaggtgataaaaatgga
cgaaaatgtatattagcaacaaatattgcagaaacatccataactattgatggtattgtt
tatgtaattgatccaggtttttcaaaacaaaaagtatataatcctagggctcgtatcgag
tccttacttattgcaccaatatctaaagcttctgctgaacaaagagctggaagagctggt
agaactaaaccaggaaaatgttttagattgtatactgaaaaatgttttgaagaaacctta
ccagaacaaacatatccagaaatattaagatcgaatttaggttcagttgtattaaattta
aagaaattagggatcgacgatttagttcattttgattttatggatccccctgctccagaa
acattgatgagagcattagagcaattaaattatttgggagctttagatgacgaaggagat
ttaacaaacaaaggacatttaatgtctgaattccctgtagatcctcagctagcgaaagtg
ttaattgaatccccaaattattcatgttcaagtgaaatattaacaatagctgcaatgtta
tctgttcctaattgttttctaagaccaaaggtaaaggttaaagaagcagatgaaatgaaa
atgagattttcacatttagatggggatcatttaactttacttaatgtatttcatgcatat
gtaaaacatgcacttgttgacacaaatgaatcaaagaaattttgttttgaatatttttta
aatcatagagctatgacatcggctcaaaatgtaagacaacaattattaagaattatggaa
agattaaatttaaaaattctttctattaaaccttcaaaccctgaatattatataaatatt
aggaaagccttattaagtggattttatcaacaagtagcatataaaacaactaaaggatat
tacattactgttaaagatatacaaatggtaaccttacacccatctaccgtttttcaaatg
aatccagaatgggttgtatatcatgaactcttattaactagtaaaaattttataagaact
gtaacaaaaattgagggaaaatggctactagaaatagctccaaattattataacttagaa
gatcttccaaatagtgaagcaaaaaatgacctcaaaatgttgcataaaaaattgaaccat
tga
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