Plasmodium falciparum Dd2: PFDG_02090
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Entry
PFDG_02090 CDS
T01051
Name
(GenBank) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pfd
Plasmodium falciparum Dd2
Pathway
pfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFDG_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfd03041
]
PFDG_02090
Enzymes [BR:
pfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PFDG_02090
Spliceosome [BR:
pfd03041
]
Complex C
Other components
Step II factors
PFDG_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_22
DEAD
S1
AAA_19
T2SSE
PhoH
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
KOB88393
UniProt:
A0A0L7M6G0
LinkDB
All DBs
AA seq
1290 aa
AA seq
DB search
MDCLSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAV
LKYIYNMIKKDNKKKKDHDNEDDVNSKENIFLQNLNYNDNNLEYKKIEMKNEKMKKYHCL
TLKNEDITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDINVTTRDLSDSSYQKK
RRKKKNSSGGSSKNTESSFETKDIKKDNKYESGKKRKYDERYYDRHSKEHHHSNKHRHSK
EHHHSNKHHHSNDHHHSNDHHHSKDHHHSNDHHHSKDHHHSNKHHHRRHISSSSDSSYCN
NKKKKEKTHRDKKNEEDKSYDDYMALKLNNIFNGTINKITDFGLFVSFKTNEGYKEGLVH
ATDILPNRKRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQRTGKNLVNDDMNKEE
DNYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSGVVF
DENIRNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNAEGSL
AKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNIGKNY
DIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGK
TTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSN
DTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLI
VTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPG
DILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCR
KCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGR
TGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVET
LIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLS
VQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALK
RAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLL
TNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKK
ISKIKLREKIEPLHNYYEEPNAWRLSRRKG
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggattgtttaagtaaaataaatttaatacgaaaagtaaatgaagaattatataacagt
ataggagtcgaggatgataacctttccgagtttttaatttacttatgtgaaaaatctaca
tccttagaagaattttgtaaggatgtttttgaaaatggaggggtgattgaacaagccgtt
cttaaatatatatataatatgattaaaaaggataataaaaaaaaaaaagatcatgataat
gaagatgatgtaaatagtaaagaaaatatttttttgcagaacttaaattataatgataat
aacttagaatataaaaaaatagaaatgaaaaatgaaaaaatgaaaaaatatcattgccta
actttaaaaaatgaagatataactaatttagtagatagtgatgaaaatgacaaaaaagaa
aaatctataaaaggtacaaaggaaaagaaagaaagtatagaaattacatctaaacaaaaa
aaaaatagtgatataaatgttactacacgtgatcttagtgattcgtcttatcaaaaaaag
agaagaaaaaaaaaaaattcttctggtggtagcagtaaaaatacggaatcatcatttgaa
acaaaagatataaaaaaagataataaatatgaaagtgggaagaaaagaaaatatgatgaa
aggtattatgatcgtcatagtaaagaacatcatcatagtaataaacatcgccatagtaaa
gaacatcatcatagtaataaacatcaccatagtaatgatcatcaccatagtaatgatcat
caccatagtaaagatcatcaccatagtaatgatcatcaccatagtaaagatcatcaccat
agtaataaacatcaccatcgtcgtcatatatcctcttcgtccgactcctcttattgcaat
aataagaagaaaaaagaaaaaacacacagagataaaaaaaatgaggaagataaatcctat
gatgattatatggccctgaagcttaataacatattcaacggcactataaacaaaattacc
gactttggattatttgtttcctttaaaactaatgaagggtacaaagaaggacttgtccat
gctacagatatactaccaaatcggaaacgcgtagttaatatgaacgaaaagtttaaaaga
aatatgaaagtaaaagtaaaagtgaaaggaattttcaatcaaaaaataagtttaaatatg
tctgaagtagatcaaagaacagggaagaatttagtaaatgatgatatgaataaagaagaa
gataattacatttctttatttgatgatataaatgaagattttaatgatttaaaaaagaaa
aatgcaaatgtattcaaagatgatccaaaggaaactttaaaatatgaaagtgttattaaa
atacaaagtgattattctaaatgggaaatacaacaattaataaagagtggagttgtattt
gatgaaaatattagaaatgaatataaaaatcttaaaatagatgaaaaaatagaagatgaa
gaagatattattgaaatagaagtaaacgaaaaagaacctgctttcttaaaaggacaaaca
acaaaagctggtgcaaaattatcacccatacaaattattgtaaatgctgaaggatcatta
gctaaagcaataacgactacatctgcattagcaaaagaaagaaaagaacaaaaacaaaat
gaacaaaatgcaatatatgataatatacctaaagatattagtagaccttgggaagatcca
aaacctaatttaggagaaagaaccatagcagaagctttaaaaaatattggaaaaaattat
gatataccagaatggaaaaaaaattataataataataatatttccgtaggagttaaaaat
acattaccaataaatgaacagagatcaaaattaccaatatataatttaaaaaatgattta
atgaaagctatcgaaaaaaataatgttctcatcgttatcggagaaacaggtagtgggaaa
acaacacaaataccacaatatttacatgaagcaaattatacagaaaaaggtattgttgga
tgtacacaacctagaagagtagcagctatgtctattgctaaaagggtaagtgaagaattc
ggatgtattttaggacaagaagtaggatattctatacgttttgatgattgtacatcgaat
gatacaataataaaatatttaaccgatggtatgttgcttcgagaaaccttaagtgacaca
ttgttaacaaaatattccttcatcatacttgatgaagcccacgaaagaaccatttctaca
gatatccttttctgtcttttaaaggatgttgttaggaaacgagcggattttaaattaatt
gttacttcagccacgctagatgcagaaaaattctcaacgtatttttttaattcgccaatt
tttactattccaggaaaaatctttcctgttgagatattacattccaaagaaccagaaagc
gattatgtcgaggccagtctcattaccgtcctgaatatccacctgaatgaacatcctgga
gacattttagtttttttaacaggtcaagatgaaattaatacagcatgtgaaatattacat
gagcgaatgaagaaattagaaagcatgtctccaccacctttaattatattacctatatat
tcttccttaccgtcagaaatgcagagtgtgattttcgaacctgctcctccaggttgtcga
aaatgcattttggctacaaatatagcagaagctagtttaacaattgatggtatatttttt
gttattgatccagggttttgtaaaattaagaaatatgattcgaagagagatatggattca
ttaattgtagctcctatatctaaagctaatgctaaacaaagagcaggtcgtgctggtaga
acgggtcctgggaaatgttatagattatacacggaagaagcatataaaaatgaaatgtca
gaaatgagtgtaccagaaatacaacgtataaatttaggtagtatagtattattattaaaa
gctttaggtataaatgattttcttcattttgattttatggactctccatcagttgaaaca
ttaatacattcactcgaaaatttatattatttaggagccttggatgataatggatattta
acaaaactaggaaagaagatggcgaactttcctatggaaccaaatttatccaaaatatta
ttaacatctttaaattttaattgtacagatgatgttgtaactattgttagtatgttaagt
gtacaaaatattttctatcgtccacaaaataaagctttattagctgataagaaaaaaaat
aaatttatcatgccacaaggtgatttaatcacatatttaaatatatataataaatggaaa
gaaaatagtttctcaaattattggtgtcatgaaaattttatacaatcaagagcattaaag
agagcacaagatgtacgtaaacaaatgctgtccatatttgaaaaatataattatcaagtt
aaaaaaagtactagtaaaaatgatgccactaaatatgtaaatatatgtaaaagtatatgc
tctggttattttaatcatgtatgtaaaagagatacacaacaaggatatacaacactctta
acaaatcaacaggtctttattcatccatcttcaacactttttaataaaaaccctttattt
gttgtatatcacgaattagtattaactaataaggaatatataagagactgtacgatcata
caaccacagtggctcatacagctcgcaccaaatcttttcataccagctgatgaaaagaaa
atatcaaaaataaagttgcgagaaaaaattgagccacttcacaattattatgaggagcca
aacgcttggcgattatcacgaaggaagggttaa
DBGET
integrated database retrieval system
