Pseudomonas ogarae F113: PSF113_0036
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Entry
PSF113_0036 CDS
T01734
Symbol
polA
Name
(GenBank) PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03030
DNA replication
pfe03410
Base excision repair
pfe03420
Nucleotide excision repair
pfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSF113_0036 (polA)
03410 Base excision repair
PSF113_0036 (polA)
03420 Nucleotide excision repair
PSF113_0036 (polA)
03440 Homologous recombination
PSF113_0036 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfe03032
]
PSF113_0036 (polA)
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_0036 (polA)
Enzymes [BR:
pfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSF113_0036 (polA)
DNA replication proteins [BR:
pfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSF113_0036 (polA)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSF113_0036 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSF113_0036 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
AEV60071
LinkDB
All DBs
Position
37734..40502
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLQMGQPDHEKLAELYTLLEFKSWFEDNQRDAKRAGQEI
VDVAEEQPGAAEAKYEVILDQARFEAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APLEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAIGG
DQSNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGTVLNDIEMPLMPVLARIERQGALV
DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLYA
FRHNLDVHRATAAEVFGVELEAVTQDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcat
gcgctgccaccgctgaccacgtccaagggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagtccgttcgccgtggtcttcgac
gccaagggtgggacgtttcgcgatgagctgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgacatgcgcgtgcagatcgagccactgcatgccagcgtcaaggccctgggg
ttcccgctgctgtgcgtggacaacgtcgaggccgatgacgtgatcggtaccctggcccgc
agcagcgcggcggccgaccgcccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgacgggcacattaccttggtcaataccatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggcgtcgctcccgagcagatcatcgattacctggcattgatg
ggcgattcgtccgacaacatcccaggtgttccgggtatcggaccgaagaccgcttccggc
ctgctggtaggcgtcaatggcggcttgaccgagctgtatgcgcaactggacatcgtcgcc
accttgccgatccgtggcgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gcgttgctttcctacgaactggcgaccatcaagaccgacgtaccgttggatgtcggcctc
gacgacctgcaaatgggccagccggatcacgagaaactcgccgagctgtacacgctgctg
gaattcaagagctggttcgaagacaaccagcgggacgccaagcgtgccggccaggagatc
gtcgacgttgccgaagaacagcccggcgctgccgaggccaagtacgaggttatcctcgat
caggcgcgcttcgaggcgtggctggccaaactggacaaagcgccgctgtttgccttcgtc
accgaaaccaacggcggcgatgcccagcattcacaactggtgggcttgtcgttcgccgtg
gcccctctcgaggcggcctacatcccgctgacccactcctacatgggcgtgccggagcaa
ctggaccgcgacacggtgctcaaggcactcaagccgctgctggaaaacccgaacaagctc
aaggtcggccagcacgccaagttcgaaaccaacatcctggccaattgcgccatcggtggc
gatcagagcaatggcatcctggtccagggcatcgccttcgacaccatgcttgaatcctac
gtgctggactccaccgcgacccgccacgacatggacagcctggcgctcaagtacctgggc
cagagcaagaccgatttccaggacatcgcgggcaaaggggtcaagcagctgaccttcgac
cagatatccctggaactggccggcccttacgccgccgaagacgccgacgtgaccttccgc
ctgcaccaggccttgcaggaaaagctggccgccacgccaagcctgggcacggtgctcaac
gacatcgaaatgccgctgatgccggtcctggcgcgcatcgagcgccagggggcgttggtc
gatgccaacctgctgggcgtacaaagtgtcgagttgggcgagaaactggtggcgctggag
cgtgaggcgtttgccatcgctggcgaggaattcaacctgggctcgccgaagcaattgggc
gtgatcctgtacgaaaagctcggcttgccggtgctcagcaaaaccgccaagggccaggcg
tccaccgccgaagcggtactcgccgagctggcggaacaggattacccgttgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgcctgccggaa
cagatcaacagccgcacgggccgcgtccataccaattaccaacaggccgtcgccgcaacc
gggcgcctgtcgtccatcgacccgaacctgcagaacattccgatccgcacggccgaaggc
cgacggattcgtcaggcgttcgtcgcgccgaaaggctacaagctgctggcggcggactac
tcgcagatcgaactgcggatcatggcgcacctggccaaggacgaaggcttgctttatgcg
tttcgccataacctggacgtgcaccgggccaccgctgccgaggttttcggcgttgaactg
gaagccgtcacccaggaccagcgccgcagcgccaaggcgatcaacttcggtttgatctac
ggcatgagcgcgttcggcctggccaagcagatcggcgtcgatcgcaaacaatcccaggct
tatatcgaccgctactttgcccgctacccgggtgtgttggcgtacatggagcgcacccgc
gcccaggccgccgagcaaggttttgtcgaaaccattttcggtcgccggctgtacctgccg
gacatcaacgcgaaaaacccggccctgcgcaaaggcgccgagcgcaccgccatcaacgcg
ccgatgcagggcacggcggccgacatcatcaagaaagccatggtggctgtggaccgctgg
ctgacggcgtccgggctggatgcgaaggtcatcctgcaggtacacgacgaactggtgctg
gaagtgcgtgaagacctggtcgaccaggtgcgcgaggaaatccgccagcacatgagcgcc
gccgccaccctggacgtgccgctgctggtggaagtgggcgtgggcaataactgggacgag
gcgcactga
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