Pseudomonas ogarae F113: PSF113_0078
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Entry
PSF113_0078 CDS
T01734
Name
(GenBank) secreted mannuronan c-5 epimerase
KO
K01406
serralysin [EC:
3.4.24.40
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PSF113_0078
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfe01002
]
PSF113_0078
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.40 serralysin
PSF113_0078
Peptidases and inhibitors [BR:
pfe01002
]
Metallo peptidases
Family M10
PSF113_0078
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5122
Peptidase_M10_C
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AEV60113
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All DBs
Position
85824..87812
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AA seq
662 aa
AA seq
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MSQSISPAASTAQKTGMVATTLWGSDKIAGIAVDPDGAIWLGAYSRLGLGGEEDSGFTGS
LVRFNANGSLDRTFSGDGKSLLPVALDIEDGGNAAVQPEGGYLVARYVNVDNVWVSGISR
NLADGSLDTSFGNGGTVTVPFYWNEDLGQQASFSVQRDGSFFASAGYPSGEIYIARFDAT
GTLVSSFGEAGVLHLPASVGIHPSGTFDVSLQGDGKVLVTGQDTLTRLNPDGTLDSSFAN
GGSLALDVHADALVIQDDGKILLAGASGGVASVIRLNADGSLDTAFGDQGRVSWGSESAP
FAVADMIVLADGKLLIGGSQGASADGYLAALVQLNPDGRLDHSFGNPDDGYYHIDGGGDA
DFLLGTDSFDDAILGGAGNDLLDGQQGRDLLTGGAGADTFRYQSVTDSYRTATAAHSDRI
TDFDPSTDTLDLASLGFLGLGNGHDGTLAIRVNESGTRTYLKSFEANADGERFEVVFDGN
LGQTLNETNLVFQQARLMGTEGADRLQGNACGEIIEGLAGDDRLYGALGDDVLVGAEGRD
LLAGGGNNDVFRFDGLSDSYRTATENHTDRLIDYTVGEDTIDLSALGFTRLGNGYNGTLD
VIFNEAKDLTYLKSYEADASGARFELSLVGDHSGYGNLNITFAEPAEGEAIQLVGVADDF
WV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagcatttcgcccgccgcttcaactgcgcaaaaaacaggcatggtcgccacg
accttatggggctcggacaaaatcgcaggtatcgcggtcgatccggacggtgctatctgg
cttggcgcttatagtcgcctggggctgggaggcgaagaggattcaggcttcaccggcagc
ctggtccggttcaatgccaacggtagcctggaccgcaccttcagtggcgacggtaaatcc
ctgctccctgtggcgctcgatatcgaggacggcggtaatgccgccgtgcagccggaaggg
ggctacctggtagcgcgctacgtgaacgtagacaacgtctgggtgtcgggcatcagtcgt
aacttggccgacggcagcctcgatacgagtttcgggaacggcggcaccgtgacagtgcct
ttctattggaatgaagatctaggccagcaagcgtcgttctccgtgcaacgcgacggcagc
ttcttcgcaagcgctgggtatccgtccggggagatctatatcgcccgcttcgacgcaacg
gggaccttggtctcgtcttttggagaggctggggtcctgcacctacccgcgtccgtcggt
attcaccccagtggcacgttcgacgtttcgctgcagggagacgggaaggtattggtcact
gggcaagataccctgacccgcctcaacccggacggtactctggatagcagctttgcgaac
gggggcagcctggccctggatgttcacgcagacgccctcgtcatccaggatgacggcaaa
atcctgctggcgggcgcctcaggcggcgtggcgagcgtcatccgactcaatgccgacggc
tcgctcgacaccgctttcggcgatcaggggcgggtcagttggggctcggaaagcgctcct
ttcgcagtcgccgacatgatcgtactggccgacggcaagctattgattggtggaagccaa
ggtgcaagcgcggacggctatctggccgccttggtccagttgaaccccgacggtcgtctg
gaccacagctttggcaatcccgacgacggctattaccacattgacggtggcggcgatgct
gacttcttgctcggtaccgactcgttcgacgatgcgatccttggcggggccggtaacgat
ctgctcgacggccagcaaggtcgtgacctgctgacgggcggtgccggggccgataccttc
cgttaccagtcagtcacagacagttatcgaaccgccaccgcggcccatagcgaccgaatc
accgacttcgaccccagcaccgatacgctcgacctcgcctccctgggcttcctcgggctg
ggcaatggacatgacggaacgctggcgatacgcgtcaatgaaagcgggacgcggacctac
ctcaaaagcttcgaggccaacgccgatggggaacgcttcgaagtggtcttcgacggtaac
ttgggccaaacgctgaatgaaaccaacctcgtgtttcagcaggccaggttgatgggtacc
gaaggagccgatcgtttacaaggcaacgcttgcggcgaaatcatcgaagggttggcgggc
gatgatcgcctttatggagcgctaggggatgatgtattggttggcgcagagggccgggat
ctattggcgggtggcggtaacaacgatgtgttccgcttcgacggactgagcgacagctac
cgtaccgccaccgaaaatcacactgatcgcctgattgactataccgtgggtgaagacacg
atcgatttgtccgccttgggctttacccggctgggaaatggttacaacggcacgttggac
gtgattttcaatgaagccaaggacctgacttatttgaagagttatgaagctgacgcctct
ggggctcgattcgagttgagcttggtgggggaccattccggttacggtaatttgaacatc
accttcgccgagcctgcggaaggggaggctattcaattggttggcgtggctgatgacttc
tgggtgtaa
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