Pseudomonas ogarae F113: PSF113_0248
Help
Entry
PSF113_0248 CDS
T01734
Symbol
ygdP
Name
(GenBank) YgdP
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSF113_0248 (ygdP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfe03019
]
PSF113_0248 (ygdP)
Messenger RNA biogenesis [BR:
pfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSF113_0248 (ygdP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AEV60279
UniProt:
A0ABM6QT48
LinkDB
All DBs
Position
complement(301830..302309)
Genome browser
AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPQETPEEALYRELNEEVGL
EREDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcccgatggtttccgtcccaatgtggggatcattcttacgaatgatgctggg
caggtgctatgggctcgccgtatcaatcaagacgcctggcagtttccccagggcgggatc
aacccccaggagacgccggaagaggccttgtaccgcgagttgaatgaagaagtggggctt
gagcgagaggatgtcgaaatactcgcctgcacccgaggctggttgcgctatcgtttgccg
caacgcctggtcaggacgcacagccaaccgctgtgcatcggccagaagcagaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagctattggtatccgttgggccaggtggtgacattcaag
cgcgaagtgtaccgacgcgctctcaaagagcttgccccgcgcctgctgacgcgcgactga
DBGET
integrated database retrieval system