Pseudomonas ogarae F113: PSF113_0307
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Entry
PSF113_0307 CDS
T01734
Symbol
rfbC
Name
(GenBank) RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00521
Streptomycin biosynthesis
pfe00523
Polyketide sugar unit biosynthesis
pfe00541
Biosynthesis of various nucleotide sugars
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01250
Biosynthesis of nucleotide sugars
Module
pfe_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSF113_0307 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSF113_0307 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSF113_0307 (rfbC)
Enzymes [BR:
pfe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PSF113_0307 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEV60340
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Position
complement(368668..369213)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLVIEPKVFGDDRGFFYESFNARAFAEATGSPLQFVQDNHSRSTRGVLRG
LHYQIEQAQGKLVRVTAGEVLDVAVDIRRSSPTFGQWASVRLSAQNHRQLWVPPGFAHGF
VVLSESADFLYKTTDYYAPSAERCIRWDDPQLAIDWELDGTPILSAKDQNGKALHEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgcttgccggacgtcctggtcatcgaaccgaaagtcttcggc
gacgaccgggggtttttctacgaaagcttcaatgcccgggcgtttgccgaagcaaccggc
agccccctgcagttcgtccaggacaatcattcacgctccacccggggcgtgttgcggggc
ctgcactatcagatcgaacaggcccagggaaaactcgtgcgcgtcaccgcgggggaggtg
ctggatgtcgcggtggacatccgccgcagctcgccgaccttcggccagtgggccagcgta
cgcctgtcggcgcagaaccatcggcaactgtgggtgccgccagggtttgcccacggcttc
gtcgtactgagcgaatcagcggacttcctctacaagaccactgattattatgccccctcg
gccgaacggtgcattcgctgggacgacccgcagctggccatcgattgggagctcgacggc
acgccgatcctttcggccaaggaccagaacggcaaagccctgcacgaggccgacctgttc
ccatga
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