Pseudomonas ogarae F113: PSF113_0309
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Entry
PSF113_0309 CDS
T01734
Symbol
rfbB
Name
(GenBank) RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00521
Streptomycin biosynthesis
pfe00523
Polyketide sugar unit biosynthesis
pfe00525
Acarbose and validamycin biosynthesis
pfe00541
Biosynthesis of various nucleotide sugars
pfe01055
Biosynthesis of vancomycin group antibiotics
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01250
Biosynthesis of nucleotide sugars
Module
pfe_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSF113_0309 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSF113_0309 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PSF113_0309 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSF113_0309 (rfbB)
00525 Acarbose and validamycin biosynthesis
PSF113_0309 (rfbB)
Enzymes [BR:
pfe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PSF113_0309 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AEV60342
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All DBs
Position
complement(370082..371164)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALIRHLILDTGHQVLNLDKLTYAGNLESLSSIDHDSRYEFVQADII
DQPNVSAVLARFKPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYSLLEATRSYWQALPE
PQRRAFRFHHISTDEVYGDLHGVDDLFTETTAYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGQQVRDWLFVEDHARALLKVVT
EGAVGETYNIGGHNEQKNIDVVRSICALLEELAPRKPEGVEHYADLISFVQDRPGHDLRY
AIDAGKIERELGWTPRETFETGLRKTVQWYLENLLWCQRVQDGSYQGERLGSLDNKDAIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctcatcactggcggtgccggcttcatcggctcggcgctcatacggcacttg
attcttgataccggacaccaggtcctgaacctcgataagctgacctacgctggcaatctc
gaatcgctgagcagcatcgatcacgacagccgctacgaattcgtccaggccgacatcatc
gatcaaccgaacgtcagtgcggtgctggcgcgattcaagcctgacgccatcatgcatctg
gcggccgagtcccacgtagaccgttccattgacggcccggcggacttcatccagaccaat
atcgtgggcacctacagcctgctggaagccactcgatcttattggcaggccctgcccgag
ccgcagaggcgcgcgtttcgcttccaccatatttctactgacgaagtgtatggcgacttg
cacggtgtggatgacctgttcaccgagaccaccgcctatgccccaagctcaccgtattcg
gcgagcaaggcggcctccgaccacttggtccgcgcctggcaacgcacctatggcttgccc
gtgctgttgaccaactgctcgaacaactacgggccgtttcactttcccgagaagctgatt
ccactggtaattctcaacgcgctggccggtaagccgctgccggtctacggcaacggccag
caagtacgcgactggctgttcgttgaagaccatgcccgtgcgctgctcaaggtcgtcacc
gaaggcgcggtcggcgagacttacaacattggcggtcacaacgagcagaaaaacatcgac
gtggtgcgcagcatctgcgcgttgctcgaagaactggcgccacgcaaacccgaaggggtc
gagcactatgccgacctgatcagcttcgtccaggatcgccccggccacgatctgcgctac
gccatcgatgccggcaagatcgagcgggaactgggctggacaccccgggaaaccttcgag
accgggctgcgtaagaccgtgcagtggtacctcgaaaacctgctgtggtgccaacgtgtc
caggacggcagttaccagggcgagcgcctgggctcgctcgacaacaaggatgcaattgca
tga
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