Pseudomonas ogarae F113: PSF113_0419
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Entry
PSF113_0419 CDS
T01734
Symbol
priA
Name
(GenBank) PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSF113_0419 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_0419 (priA)
Enzymes [BR:
pfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSF113_0419 (priA)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSF113_0419 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
HypA
iSirtuin
PriA-like_WH
nSTAND3
TrwB_AAD_bind
AAA_22
AAA_11
DUF2428
ADDB_N
RUBY_RBDX
Zn_ribbon_3
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AEV60453
LinkDB
All DBs
Position
complement(495958..498177)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRLRVPFGRREMIGILVEVTDHSEVP
VDKLKPALALLDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWSVAPGASLDDPRIARAPRQREALTTLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEVRRHAPGVRHEHWLAQPELPLNAEQRAACEAIRAGLDSYHAFLLAGVTGSGKTEVYLQ
LIRQTLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLEAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRHGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAQQNLTGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSAWLLVLEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgcctcgccttgccttcgcccctgcgccgcctgttcgactac
cgcgccccggccggggtcctgcgcgcccagttgcagccgggcatgcgtctgcgggtgccg
ttcggccggcgggagatgatcggcatcctggtggaggtcaccgaccacagcgaggttccg
gtcgacaagctcaaaccggccctggccctgctcgatgccacgccaccgctgcccgcctcg
ctgttcaagttgtgcctttggacctcccagtattaccagcacagcctcggcgacactctg
agctgggcgctgccggtgctgctgcgccagggcgaaccggccgaggcgcgccaggagcgt
ttctggtcggtggcccccggcgcctcgctggacgacccgcgcatcgcccgtgccccgcgc
cagcgtgaggccttgacgaccctggcccagcatccccacggcgtggcgcatcaattgctg
agcaaactgatgctcagcaaggacagtctcgatctgctgctggccaaggacctggtgcag
gtggaagtgcgcaggcacgcccccggtgtccgccatgaacattggctggcccagccggaa
ctaccgctcaacgccgaacagcgggctgcttgcgaagcgattcgcgcaggtctcgacagc
tatcacgcctttctgctggccggtgtcactggcagcggcaagaccgaggtctacctgcaa
ctgatccgccagaccctggaggccggcaagcaggccctggtgctgattccggaaatcaac
ctcggcccacaaaccctggcgcgcttcgaacagcgcttcaacgcccggatcgccctggtg
cattcggccgtcaacgaccgcgaacgcctggaggcctggctcgccgcccgtgacggcgag
gccgatatcatcatcggcacccgttcggccctgttcacaccgatgaagaaccctggcctg
atcatcatcgacgaagaacacgacggctcttataaacagcaggaaggcctgcgttatcac
gcccgcgacctggcgctggtgcgcgcccgccaggaaaacatcccgatcgtcctcggctcg
gccacgccatcgctggaaagcctgcacaacgcctacaccggccgctacggcctgctgcgc
ctcaatgagcgggccggcggcgccaagcaaccgcgcttcctgcgcctggacgtgaaaagc
cgtccgctggacagcggtatttccgggccgatgcagcaagccattggccagaccctggcc
gccgggcaacaggttctggtgttcctcaatcgccgcggttttgccccgaccctgctgtgc
cacgactgcggctggatgtcgggctgcgaacgttgcgacgcacggatgaccgtgcatcaa
cgccatggcgagctgcgttgccaccattgcggtcacgtcgagcgcgtgccaaggcattgc
ccgcagtgcggcaaagtggacttgcgcccggtcggtgccggcaccgagcgtgccgaagaa
cggctgggcatcctgttccccgattacccggtactgcgggtggaccgcgacagcacctcg
cgcaaggacgcgatgaaccagttgttcgccacgatccagaagggccagccgtgcatcctg
gtgggcacgcagatgctcgccaagggacaccacttcccacgggtcacgctggtgtcgatc
ctcgacgccgatggcggactgttctccggtgatttccgcgccagcgagcgcatggcgcag
ttgatcgtccaggtcgcaggccgggccgggcgggccgaggagccgggcaaagtgatcatc
cagacgcacctggccgatcatccgctgttgatccaactgaccgaacaaggttatttcgcc
ttcgccgaacaggccttgagcgaacgccgcagcgccggcctgccgccttttgcccacctg
gcgctgttgcgggccgaagcccacaagccggggcaggccgaaggctttctcgatgaggcc
tgcagcgaggcagagcgcttgctggcgcagcagaacctcaccggcatcgaactcctgggg
ccggtaccggcaccgatggaacggcgggccgggcgctatcgcgcgcagcttttattgcaa
gccaatgcccgggcaccgctgcatcgactgctgagcgcctggctgctggtgctggaacag
atgcccagcgggcgggcggtgcgctggtcgctggatgtggatccggtggatttgtattag
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