Pseudomonas ogarae F113: PSF113_0711
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Entry
PSF113_0711 CDS
T01734
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSF113_0711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_0711
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSF113_0711
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSF113_0711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEV60742
LinkDB
All DBs
Position
850389..853841
Genome browser
AA seq
1150 aa
AA seq
DB search
MPDAMSLSPAFMVVHGNRLDELRSLVISLMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPQDDDSGGCGIAAAIDVQLPGSFMWQLYRTVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
IEQPHFEPLRRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQTRNVRGE
IKPLAPANCWQAELWRALLLDVGELGMAQSRAGVHQRYIERINSLEFAPKGLPARVIVFG
ISSLPAQVLEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKAGMPVVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSVFRDGRIDLFTDGAPTTLLSQL
QDDILELRPLNETREHWPVVDTERDSSIRFHVAHGAQREVEILHDQLLAHFSADTTLRPR
DIIVMVPDIDSYAPHIRAVFGQLDRSDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFGIDEADLPTLHRWIEGAGIRWGMSAEHRAGLGLPAELEQNS
WHFGLRRMLLGYAVGSSNAYEGIEPYDEIGGLDAALIGPLVALLDALEVAHQELTRPASP
QQWGSRLQDLMQLFFQASNEHDDYLLAQLEDLRETWLETCESVGLHDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGGDYRP
GDRSRREDDRYLLLEALLSAREKLYISWVGRSIRDNSERPASVLIGQLRDHLANGWRLAD
DSENLLDALTQEHPLQPFSARYFHQGDALFSYASEWRMLHDISDDADTTQVLEPYVQEEP
LGLGQLQDFLRNPVRHFFSQRLKVFFEAIEAPLADDEPFVLDALQRYSLSDSLLDAALVH
LDQPDLALTAHAKRLQNSGLLPMAGFGECMQRELIEPLPDLLQRYQQLLALWPTPSVSAV
PVSLQLQGVNVEGWLSGLHQRSDGAVLAITAIPNSIGSTKTRKWHRLIRPWVNHLVACAN
GLSLTTALVASDDSLLLAPFDEPVAQRLLGDMLLAWQTGMRQPLPIAVKTAFAWLGQTDP
VKAEAAARKAYEGDGQTFEGERRESPALARQFADFDALMADETFPDWCDALYRPLLEAPW
RSLVSEEARS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcaatgtccctcagccctgctttcatggtggttcacgggaatcgccttgat
gaattgcgcagcctggtgatcagcttgatgcggcgttatccgctggcaccccttgaaaat
gaaatcgccctggtacagagcaacggcattgcccaatggctcaagctcgcattggctgaa
gacccgcaagacgatgattccggcggttgcggtattgcggctgccattgatgtacagctg
ccgggcagtttcatgtggcagctttatcgaacagtcctgggacgtgacgaaattccggcc
aagtccctgctggataaggctccgctgacctggcgcctgatgcgtctgctgccgcagttg
atcgagcagcctcatttcgaacctctgcgacgattccttacccacgacaccgacttgcgc
aagcgctatcaactgtccgagcgtcttgccgatctgttcgaccagtaccaggtctaccgg
gccgactggcttgaggattgggcggaaggtcgacaccagacaagaaatgtccgaggcgaa
ataaagccgctcgcgccggcaaattgctggcaagcggaactgtggcgcgccttgttgctg
gatgtgggagagttgggcatggcgcaaagccgtgccggcgttcatcagcgctacatcgaa
cgtatcaacagcctggaattcgccccgaaaggcctgcctgcgcgggtcatcgtgtttggt
atttcttcgttgcctgcccaagtcctcgaggcgctcgccggcctttcccggttcagccag
gttctgctctgcgtacataacccgtgtcgccatcattgggcggacatcgtcgccgacaag
gatttgttgcgtcaccagtacaagcgccaggcacgcaaggctggcatgcccgtcgtcctc
gatccgcaaaccctgcatcaacatgcccatccgttattggccgcctggggcaagcaaggg
cgcgactatatcaacctgctcgacagctacgatgatcccaacagttatcgctcggtattt
cgcgatgggcgaatcgacctgttcaccgatggggcccccacgacccttctcagccagttg
caggatgacatcctggagctgcgcccgctgaatgaaacccgggaacactggcctgtcgtc
gatacggaacgagacagctcgattcgttttcatgtggcccacggcgcccagcgtgaagtc
gaaattctccacgaccaattgctggcccacttcagtgcggatacgactttgcgcccacgg
gatatcatcgtcatggtcccggacatcgacagttatgcaccgcacattcgcgcagtattc
ggccaactcgacaggagcgacccgcgtttcattcccttcacgctgaccgaccagggccag
cgtggacgtgatccattgctgatcgccgtcgagcatttgctcaagctgccggacagtcgt
ttcccggtcagtgaaatcctcgatctgttggatgttcccgcgttgcgcgaacggtttggc
atcgatgaggccgacctgccgacactgcaccgctggatcgaaggcgccggcattcgctgg
gggatgagcgccgaacaccgtgccggcttgggcctgcctgccgagcttgagcagaacagc
tggcattttggcttgcgtcgcatgttgctggggtatgccgttggcagttcgaacgcttat
gagggcattgagccttatgacgagatcggtggcctggatgcggcgttgatcggtcccttg
gttgcattgctggatgccctggaggtcgctcatcaggaactcacccggccggcatcgccg
cagcaatggggttcacgcctgcaagatttgatgcagctgtttttccaggcaagcaacgag
catgacgactatttgctggcccaactcgaagacttgcgtgaaacctggctggagacctgt
gagtcggtggggctgcacgatgaattgccgctgacggtagtacgagaggcgtggttggcc
ggactggatcaggggcgactgtcccagcgtttcctggccggcgcagtcaacttctgtacc
ttgatgccgatgcgcgcgatccccttcaagctggtgtgcctgctggggatgaatgatggg
gattacccgagagcccagccgcctttggacttcgacctgatgggtggcgattatcgtccg
ggcgatcgttcccgccgtgaggacgatcgttacctgctgttggaagcgctgctttctgcc
cgggaaaagctgtacatcagttgggtggggcgcagtattcgcgacaacagcgagcgcccg
gcatcggtgttgatcggccaactgcgcgatcatctcgccaatggttggcggttggcagat
gacagcgagaatcttctcgatgccctgacccaggagcacccgctgcaaccgttcagtgcg
cgttatttccatcaaggcgatgcgctgttcagttacgccagcgaatggcgaatgctccac
gacatctccgatgacgccgacacaacccaggtgctagagccttacgttcaggaagaaccc
ttgggccttgggcagttgcaggatttcctgcgcaatcccgttcgccatttcttcagtcag
cggttgaaagtgttcttcgaggccatcgaagcgcctctggccgatgacgaacctttcgtg
ctcgatgcgctgcaacgctacagcctgagtgacagcttgctcgatgccgccctggtacac
ttggaccagccggatcttgccctcaccgctcacgccaaaagactgcagaacagtggcctg
ttgcccatggccggtttcggtgaatgcatgcagcgtgaattgatcgaacccctgccggat
ctcctccagcgttaccaacagcttctagctttatggccgacaccgtcggtcagcgctgtg
ccagtcagcctgcaattgcagggagtgaatgtcgagggctggctcagtggtttgcaccag
cgttccgacggtgcggtcctcgccatcacggccatacccaacagcattggctccaccaag
acccgtaagtggcatcgcttgatacggccttgggtcaatcatctcgtggcctgcgctaat
ggcttgtcgttgacgacggcactggtggccagtgatgacagcttgctgctggcacctttt
gacgagcctgtcgcacaaaggctgctgggcgacatgctgttggcctggcagaccggtatg
cgccagccgctaccgatcgcggtgaagacggcttttgcctggctcggccagactgatccg
gtcaaggccgaagcggcggctcgcaaagcctatgagggcgatggacagacatttgaaggc
gaacggcgggaaagtccggcgttggctcgacagtttgctgatttcgatgccttgatggct
gacgaaacattccccgattggtgcgatgcactctaccgaccattgctcgaagccccatgg
cgttcattggtcagcgaggaggcccgttcatga
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integrated database retrieval system
