Pseudomonas ogarae F113: PSF113_0872
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Entry
PSF113_0872 CDS
T01734
Symbol
truB
Name
(GenBank) TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_0872 (truB)
Enzymes [BR:
pfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSF113_0872 (truB)
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSF113_0872 (truB)
Prokaryotic type
PSF113_0872 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AEV60902
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All DBs
Position
1050108..1051025
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADIEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
ctggggttcacgtccaacgcggcgttgcagaaggttcgctggctgctcaatgctgaaaag
gccgggcacaccggtagcctcgatccgctggccaccggcgtgctgccgctgtgctttggc
gaggcgaccaagttttcccagtacctgctcgattccgacaagggttatgaaaccctggcg
caactgggcaagaccaccaccacggcggatgccgagggtgaggttttgctcgaacgcccg
gtgaccgttggtcaggccgatatcgaagcggttttgccgaaatttcgcgggcaaatcagt
cagataccgccgatgtactcggctctgaagcgtgatggccagccgctgtataaactggct
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaatta
ctggcctttgacggtaatactgcgcggctggccgtggattgcagcaagggcacctatatc
cggaccctggtggaggatattggtgaacagctcggctgtggcgcgtacgtggcagaattg
cgacggacccaggccgggcctttcacgttggcccagacggtcacgctggaagagcttgaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgtttcctgatgccatcggacagc
gggttgctggattggccgctgttgcagttctcggaacacagtgcgttctactggctcaac
ggccagccggtacgtgccccggatgcgccgaagttcggcatggtccgggtgcaggatcat
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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