Pseudomonas ogarae F113: PSF113_1005
Help
Entry
PSF113_1005 CDS
T01734
Symbol
secD
Name
(GenBank) SecD
KO
K03072
preprotein translocase subunit SecD
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03060
Protein export
pfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSF113_1005 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSF113_1005 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_1005 (secD)
Secretion system [BR:
pfe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSF113_1005 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AEV61034
LinkDB
All DBs
Position
1206052..1207920
Genome browser
AA seq
622 aa
AA seq
DB search
MLNKYPLWKYVLILAVLAVGLIYSAPNLYPDDPAIQVSGASTALQVTQADLDRASAALKA
SNIEVKAASIAENGKGGLLRLVKAEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRKLG
AHPMKLGLDLSGGVHFLLEVDMDKALDARMKVYEGDVKSLLRKDRVRYRSLPPLDGAIQL
GFSDEDTREQARALIRKNFNDFDIVPADLNGQAVLRLAMTPAKLAEIREYSIKQNLTTVR
NRVNELGVAEPIVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGASKATSE
SFEFREGGRPAAQIERGLIITGDQVTDAQAGFDEQGRPQVNIRLDGHGGELMSRATRSNV
GRSMAVIFIEQKPTTTYTKQVVNGVEKDVPVQTFKEEKKIISLATIQSPLGSQFRITGLN
GQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGVDASLWGMLFVSLFIIAIY
RFFGLIATVALAVNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIA
AGMSIQRAINEGFGRAFTAIVDSNLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTA
ILVTRAMVNLIYGGRDFKKLWI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaataccctctgtggaaatatgtactgatcctggcggtgctggcggtcggt
ctgatttattccgctcccaatctatacccggatgacccggccattcaggtcagtggcgca
agcactgcgctgcaggtcacccaggccgatctggaccgtgcgagcgctgcgctcaaggcg
tccaatatcgaggtcaaggctgcgtccatcgccgaaaacggcaagggcggcctgttgcgc
ctggtcaaggctgaagaccaactgccagccaaggacgtggtccgcaaggcgttgggcgac
gattacgttgtggccctgaacctggcccagaccactccgcaatggctgcgcaaacttggc
gcgcatccgatgaagctgggtttggacttgtccggtggtgtgcacttcctgctggaagtg
gacatggacaaagccctcgacgcgcggatgaaagtctacgaaggcgacgtcaagagcctg
ttgcgcaaggaccgcgtgcgttatcgcagcctgccgccactcgacggtgccattcagctg
ggcttcagcgatgaagatacccgcgagcaggcccgtgcgctgatccgcaagaatttcaac
gatttcgacattgtaccggccgacctcaatggtcaggcggtgctgcgtctggcgatgacc
ccggccaagctggcggaaatccgcgaatactccatcaagcagaacttgaccacggtgcgt
aaccgcgtcaacgagctgggtgtggccgagccgatcgtgcagcgccaaggtgccaaccgc
atcgtggttgagctgccaggcgtacaggacactgccgaagccaagcgtatcctcggcaag
accgccaacctggaattccgcctggccgctgagccgggtgcttccaaggccacttccgag
agtttcgagttccgtgaaggcggtcgtccggcggcgcagatcgagcgtggcctgatcatc
accggcgaccaggtgaccgacgcccaggcgggcttcgacgagcagggtcgtccacaggtg
aacattcgcctggacggccatggcggcgaactgatgagccgcgccacgcgcagcaacgtc
ggtcgcagcatggcggtgatcttcatcgagcagaagccgaccaccacctacaccaagcaa
gtggtcaacggcgtcgagaaagacgtaccggtgcagaccttcaaggaagagaagaagatc
atcagcctggcgaccatccagtcgccactgggcagccagttccgcatcaccggcctgaac
ggccagggtgaatcctcggaactggccctgctgctgcgtgccggtggcctggccgcgccg
atgtacttcgcggaagagcgcaccattggcccgagcctgggtgccgacaacatcaccaag
ggtgtcgatgcatctctgtggggcatgctgttcgtgtcgctgttcatcatcgccatctac
cgcttcttcggcctgatcgccacggttgcgctggcggtgaacatggtgctgctgctggca
ctgatgtcgctgctgggggccacgctgaccctgccgggtatcgccggtatcgtcctgacc
atgggcatggcggtggacgccaacgtgctgatcttctcgcggatacgtgaagagatcgcc
gcgggcatgtcgatccagcgggcaatcaacgaaggcttcggccgggcgttcactgcgatt
gtcgactccaacctgaccacattgctggtcggcgggattctctttgccatgggcaccggc
ccggtcaagggcttcgcagtgaccatgtccctcgggatctttacctcgatgttcacagcc
attctggtgacccgtgcaatggtcaacctgatttatggtggccgtgacttcaagaagttg
tggatttaa
DBGET
integrated database retrieval system
