Pseudomonas ogarae F113: PSF113_1057
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Entry
PSF113_1057 CDS
T01734
Symbol
ffh
Name
(GenBank) Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02024
Quorum sensing
pfe03060
Protein export
pfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSF113_1057 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSF113_1057 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSF113_1057 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_1057 (ffh)
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSF113_1057 (ffh)
Secretion system [BR:
pfe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSF113_1057 (ffh)
Eukaryotic Sec-SRP protein
PSF113_1057 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
YqeC
AAA_33
AAA_24
ParA
KTI12
AAA_31
cobW
nSTAND3
Thymidylate_kin
ABC_tran
6PF2K
AAA_16
AAA_30
Helicase_RecD
AAA_17
AAA_18
Mg_chelatase
AAA_5
AAA_19
SLFN-g3_helicase
NACHT
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AEV61086
LinkDB
All DBs
Position
1263680..1265056
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIAQAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctaaccgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcg
aaactgaccgaggacaacatcaaagacaccctgcgcgaagtgcgcatggcgttgctcgaa
gccgacgtcgccctgccggtggtcaaggacttcgtcaattcggtcaaggaacgcgccgtc
ggcaccgaagtgtcgcgcagcctgacaccgggccaggcgttcgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgccgccaacgaagacctgaacctgagtgccgtaccgcca
gcggtggtgctgatggccggcctgcagggcgcgggcaagaccacgacagccggcaaactg
gcgcgcttccttaaagagcgcaagaagaagtcggtgatggtggtgtcggcggacatctac
cgtccggcggcgatcaagcaactggaaaccctggccaacgacattggcgtgacgttcttc
ccgtccgacctgagccagaagccggtggacatcgcccaggcggctattaaagaagcaaaa
ctgaaattcatcgacgtggtcatcgtcgataccgccggtcgcctgcacatcgatgaagag
atgatgggcgagatcaaggcgctgcatgccgcgatcaacccggtggaaaccctgttcgtg
gtcgatgccatgaccggccaggacgcggccaacaccgccaaggcgttcggtgatgcactg
ccgctgaccggcgtgattctgaccaaggtcgacggcgacgcccggggcggtgccgcgctg
tcggtacgcgccatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgagccgttccaccccgagcgtatcgcttcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagaccctcgacaaggacaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgcgaccagctgcaacaa
atgaagaacatgggcggccttggcggcctcatggacaaactgccgaacatcggtggcgtg
aacctggcgcagatgggcaatgcccagggcgcggctgaaaagcagttcaagcagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaagcgccgtatcgccatgggttccggcacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgccaagggcggaatggcc
aagatgatgcgcggcatgggcggtatgttgcccggcggcggcatgccgaaaatgtaa
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