Pseudomonas ogarae F113: PSF113_1092
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Entry
PSF113_1092 CDS
T01734
Symbol
lysS
Name
(GenBank) LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSF113_1092 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfe01007
]
PSF113_1092 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_1092 (lysS)
Enzymes [BR:
pfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PSF113_1092 (lysS)
Amino acid related enzymes [BR:
pfe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PSF113_1092 (lysS)
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PSF113_1092 (lysS)
Prokaryotic type
Other AARSs
PSF113_1092 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEV61121
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All DBs
Position
1302373..1303875
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AA seq
500 aa
AA seq
DB search
MSDLELDPQALQQEENSLIALRKEKLAAERAKGQAFPNDFRRDAYCDVLQKLYADKTKEE
LAEAAIPVKVAGRIVLDRGSFMVIQDMTGRLQVYVNRKTLPEETLAAVKTWDLGDIIAAE
GTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFR
VRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGTTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIEKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIAN
AYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagaactcgacccgcaagccctgcaacaggaagaaaactccctgatcgcc
ctgcgcaaggaaaagcttgctgccgagcgcgccaagggccaggccttccccaacgacttc
cgccgcgacgcctactgcgacgtcttgcagaagctgtatgcggacaagaccaaggaagag
ctggccgaggcggcgattccagtcaaggtggccggtcgtatcgtgctcgatcgtggttcg
ttcatggtgatccaggacatgaccgggcgcctccaggtctacgtcaaccgcaagaccctg
ccggaagaaaccctggccgccgtcaagacctgggacctgggcgacatcattgccgccgaa
ggcaccctggcccgttccggcaagggcgacctgtacgtcgagatgaccagcgtgcgcctg
ctgaccaagtccctgcgcccgctgccggacaagcaccacggcctgaccgacaccgagcag
cgctatcgccagcgctacgtcgacctgatcgtcaacgaagacgtgcgccagacgttccgc
gtgcgctcgcaagtcatcgcccacatccgcagcttcctgatgaagcgtgacttcctggaa
gtcgagacgccgatgctgcagaccatccccggcggtgcggcggccaagccgttcgaaacc
caccacaacgccctggacatggaaatgttcctgcgtatcgcgccggagctgtacctcaag
cgtctggttgtgggtggcttcgaaaaagtcttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgacccggcacaaccccgagttcaccatgctcgagttctaccaggcctacgcc
gactatgaagacaacatggacctgactgaggagctgttccgcgagctggcccagcttgtt
ctcgggacgaccgacgtgccgtacggcgacaaggtgttccacttcggtgagccgttcgtg
cgcctgtcggtgttcgactcgatcctcaagtacaaccctgaactgactgccgatgacctg
aacgacatcgaaaaggcccgcgccatcgccaagaaggccggtgccaaggtgctcggcttc
gaaggcctgggcaagctgcaagtgatgattttcgaagagttggtcgagcacaagctggaa
cagccgcacttcatcacccagtacccgttcgaagtgtcgccgctggcccgtcgcaacgac
gagaacccaagcgtgaccgaccgtttcgagctgttcatcggtggccgtgaaatcgccaac
gcctattccgagctcaacgatgcagaagaccaggccgagcgtttcatggcccaggtggct
gacaaggacgccggcgacgacgaagccatgcactacgatgccgacttcgtgcgtgctctg
gaatacggcatgccgccgaccgctggcgaaggtatcggcatcgatcgcctggtgatgttg
ttgaccaactctccgtcgatccgggacgtgattctcttcccgcacatgcggcctcaagcg
taa
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