Pseudomonas ogarae F113: PSF113_1301
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Entry
PSF113_1301 CDS
T01734
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00061
Fatty acid biosynthesis
pfe00071
Fatty acid degradation
pfe01100
Metabolic pathways
pfe01212
Fatty acid metabolism
pfe02024
Quorum sensing
pfe04146
Peroxisome
Module
pfe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSF113_1301
00071 Fatty acid degradation
PSF113_1301
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSF113_1301
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSF113_1301
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfe01004
]
PSF113_1301
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfe04147
]
PSF113_1301
Enzymes [BR:
pfe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSF113_1301
Lipid biosynthesis proteins [BR:
pfe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSF113_1301
Exosome [BR:
pfe04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSF113_1301
Exosomal proteins of breast cancer cells
PSF113_1301
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEV61328
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Position
1523259..1524947
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AA seq
562 aa
AA seq
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MQPDFWNDKRPTGVPLDVDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQAHTDLAPGDRIAVQMPNILQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDLQYLIEAKMGDLMPTAKGWLVNTMVSKVKKMVPAYS
LPQAISFKSALRLGRGQGIKPLNVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQLGDDGHPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKNWRFSLLLGLNTLFVALMDHPDFKTLDFSNLKVTNSGGTALIKATAERWEQITGCG
ITEGYGLTETSPVASANPYGGKSRLGTVGMPVPGTLMKVINDDGVEQPLGERGELCIKGP
QIMKGYWNKPEATAEVLDHEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTGYKIPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgatttctggaatgacaaacgcccgaccggcgtgcccctggatgttgacctt
ggggcctacaagtcggtgatcgaggtgttcgaacgttcctgtaagaaatttgccgaccgt
ccggcgttcagcaacatgggggtgacgctcacctatgccgagctcgagcgctacagcgcg
gctttcgccggctacttgcaagcccataccgacctggcgccaggtgatcgaatcgcagtg
cagatgcccaacatcctgcaatacccgatcgccgtgttcggtgccttgcgcgccgggctg
gtggtggtcaacaccaacccgttgtacaccgcgcgggaaatgcgtcatcagttcaaggac
tccggtgcccgggcgctggtgtacctgaatatgttcgggcagaaagtccaggaggtgttg
cccgatacggacctgcagtacctgatcgaagcgaagatgggcgacctgatgcccaccgcc
aagggctggctggtcaacacgatggtgagcaaggtcaagaaaatggtcccggcctattcg
ctgccccaggccatttccttcaagagcgccttgcgcctgggacgcggccagggcatcaag
ccgctgaacgtcagcctcgatgacattgcggtgttgcagtacaccggcggcaccaccggg
ttggcgaagggcgcaatgctgacccacggcaacctggtggccaacatgcaacaggcccgg
gcctgcctggggcagctcggcgatgacggccatccattgttgcgcgaaggccaggaggtc
atgatcgcaccgctgccgctgtaccatatctatgcgttcacggcgaactgcatgtgcatg
atggtgaccggcaaccacaacgtgctgatcaccaatccgcgggacatcggtggtttcatc
aaggagctgaagaactggcgtttctcgctgctgctggggctcaacacgttgttcgtggca
ttgatggaccatccggatttcaagaccctggatttttccaacctcaaggtcaccaactcg
ggtggcacggcgctgatcaaggccaccgccgagcgttgggagcagatcaccggttgtggc
attaccgaggggtatggcctgaccgaaacctcaccagtggccagtgccaatccttatggt
ggcaagtcccggttgggcacggtggggatgccggtgccgggcacgctgatgaaagtgatc
aacgacgatggcgtcgagcagcccctgggcgagcgcggcgagctgtgcatcaagggcccg
cagatcatgaaaggctactggaacaagcctgaggccacggccgaagtgctggaccacgag
ggctggttcaagtccggcgatatcgcagtgattgacccggacggtttcgtgcggatcgtc
gaccgcaagaaggacatgatcatcgtctcgggtttcaatgtgtaccccaacgagatcgaa
gacgtggtgatggcccatcccaaggtggccaactgcgcggtgatcggcgtgccggacgaa
cgttcgggggaggcggtgaagctgttcgtggtggcgcgtgaaaccggggtcagccttgaa
gagctcaaggcctactgcaaggagaatttcaccggttacaagattcccaagcacatcgtg
ctgcgggagtcgttgccgatgaccccggttggcaagattttgcggcgggagttgcgggat
atcgcctga
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