Pseudomonas ogarae F113: PSF113_1330
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Entry
PSF113_1330 CDS
T01734
Symbol
rapA
Name
(GenBank) RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfe03021
]
PSF113_1330 (rapA)
Transcription machinery [BR:
pfe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PSF113_1330 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEV61357
UniProt:
A0ABN5G4W7
LinkDB
All DBs
Position
complement(1552858..1555704)
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DVITHFEGWKMTVREVDDVDGLLVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQASPQYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLTAVNDGDVEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDEYLELPLGDHPELYPEVSFQAQPDASEEERWWRFDPRVEWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIELHAPYLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGQWQALIDEARTERERLE
AELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLAARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRQQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtacgcgctacggaatgcgccgctcacccgtgtacggttttcgccgggc
gatgtgatcactcacttcgaaggctggaaaatgaccgtgcgcgaagtcgatgacgtcgat
gggctactggtctaccacggcctcaacgggcagaacgaagtcgtcaccctgcccgaaacc
caactgtcgaactttatccagttccgcctggcgagcgaccgtctgttcgccggccagatc
gacccactggcctggttctccctgcgctaccacaccctggaacacaccagtcgccagttg
cagtcttcgctttggggcctgggcggcgtccgtgcccagccgattgcccaccaattgcac
attgcccgagaagtagccgaccgcattgcgccgcgggtgttgctggcggacgaagtgggc
ctgggcaagaccatcgaggccggcctggtcatccaccgtcagttgctgtccggccgcgcc
aaccgcgtcctgatcctggtgccggaaaacctccagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggtcgcgctgttcgacgaagaacgcttcattgaaagcgatgcc
agcaacccgttcgaagacactcaactggccctggtggcgttggagtggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggttgggacctgatggtggtcgacgaggcc
catcacctggtgtggcacgaagaccaggccagcccgcaatacgccctggtcgaacaactc
gccgagacaatcccgggcgtgctgctgctgaccgcgaccccggaacaactgggccaggac
agccacttcgcccgcctgcgcctgctggacccgaatcgcttccacgacctcaaggccttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgtgcaggagctgctggacaag
ggccgtctctcgcctgaggcccacaagaccatccacggctttttgggcaacgaaggcgaa
gccttgctgaccgccgtcaatgatggcgatgtcgaagccagtgcccgcctggtgcgtgag
ttgctggaccgccacggcaccggccgcgtgctgtttcgcaacacccgcgccgctgtgcag
ggcttccccgagcgcaagctgcatgcctacccgctgccgtgcccggacgaatacctcgag
ctgcccctgggcgatcaccccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagaacgctggtggcgtttcgacccgcgggtcgagtggctgatcgacacc
ctgaagatgctcaagcgcaccaaagtattggtgatctgtgcccacgccgaaaccgccatg
gacctggaagacgcattgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctggagcgcgaccgcgcggcggcctatttcgccgacgaagagttcggtgcc
caggtgctgatctgttcggaaatcggcagtgagggccgcaacttccagttcgcccatcac
ctggtgctgttcgatctgccggcgcacccggacttgctggaacaacgcatcggtcgtctg
gaccggatcggccagaaacacaccatcgaactgcacgcgccgtacctggaaaccagcccg
caagcgcggctgttccagtggtatcacgaagcgctgaatgccttcctcaacacttgcccg
accggcaacgccttgcaacaccagttcggcccacgcctgctgccattgctggaagaagcc
gacgatggccagtggcaagcgctgatcgacgaggcccgcaccgaacgcgagcgcctggaa
gccgagctgcacaccggtcgcgaccgtttgctggagctcaactccggcggcgccggtgaa
ggcgatgcgctggtggaagccattctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcctttggtatcgacagcgaggaccattcggaaaatgcgctg
atcctcaagccgagcgaaaaaatgctcgatgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcactgtcacgcgaagacatgcagttcatcacc
tgggagcacccgatggtgcaaggcggcatggacctggtgctgtccggttccatgggcaac
accgccgtggcgctgatcaagaacaaggccctcaagcccggcaccgtgttgctggaactg
ctctacgtcagtgaagtggtggccccgcgctcgctgcaactgggccgttacctgccgccg
gccgccctgcgctgcctgctggacaccaacggcaacgacctggccgcccgggtctcgttc
gaaaccttgaacgaccagctcgaaagcgtgccccgcgccagcgccaacaagttcatccag
gcccagcgcgaccagctcacgccccggatcaatgccggcgaagaaaagatcgccccgcgc
cacgccgagcgcgtggccgaggcccagcgtcgcctggccgccgataccgacgaggaactg
gcacgcctgaccgccctgcaagcggtcaacccgaccgtgcgcgacagcgaactggtagcc
ctgcgccaacagcgcgagcaagggctggcgatgcttgagaaggcggcgttgcgtttggag
gcgattcgggtgttggtggcgggctga
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