Pseudomonas ogarae F113: PSF113_1400
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Entry
PSF113_1400 CDS
T01734
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSF113_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_1400
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSF113_1400
DNA repair and recombination proteins [BR:
pfe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSF113_1400
Prokaryotic type
PSF113_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEV61425
LinkDB
All DBs
Position
1626717..1627409
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AA seq
230 aa
AA seq
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MTADDRIKLEPSWKQALRAEFDQPYMAELREFLRSEYAAGKEIYPPAPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIFKELKRDLNIDIPNHGYLQSWA
DQGVLLLNTTMTVERANANAHAGKGWQHFTDRVIEVVSEHQPNLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFGRTNKFLEQHGEAPIDWRLPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgacgaccgtatcaaactcgaaccgagctggaagcaggcactgcgtgccgag
ttcgaccagccctacatggcagagttgcgcgaattcctgcgcagtgaatacgccgccggc
aaggagatttacccaccggcaccgctgattttcaatgccctcaattccacgccgctggat
aaggtcaaggtggtgatcctcggccaggacccgtaccacggcccgggccaggcccatggt
ttgtgcttctcggtacaaccgggcgtgccggctcccccctcgctggtgaacatcttcaag
gaattgaagcgcgatttgaacatcgacattccaaatcacggctacctgcaaagctgggcc
gaccagggcgtgttgctgctcaacaccaccatgaccgtggagcgcgccaacgccaacgct
cacgcgggcaagggctggcagcatttcaccgaccgggtcatcgaagtcgtcagcgaacat
cagccgaacctggtcttcctgctgtggggcgcccatgcccagggcaagcagaagctgatc
gacgccaccaagcatttggtgttgacctcggtccacccgtcgccgttgtcggcttatcgt
ggtttcttgggctgcgggcattttggccggaccaacaaattcctcgagcagcatggcgag
gcgcccattgattggcgattgccgccgctttaa
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