Pseudomonas ogarae F113: PSF113_1445
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Entry
PSF113_1445 CDS
T01734
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_1445
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PSF113_1445
Transfer RNA biogenesis [BR:
pfe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PSF113_1445
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AEV61469
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All DBs
Position
1671744..1672877
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AA seq
377 aa
AA seq
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MAIDIHWIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPL
TIDNWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRPKLSDEKYRWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNRII
REHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGQFLLDLIQRAASVPPEQWPPAVAEPL
PIEAAALVKRLRALGQAEAERLEIAPELMLRKKTLEALIKSGFPEGPYQLPDSLRGWRRE
LMGQALLDSLATVGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcagttttgcgccgag
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttttac
cctattgctggtttattgcagatcggcgacggcaagcgtgcctacctgatcgaccccttg
accatcgacaattggcaacccttggccgcgctgctggaaaacccggcggtgctcaaggtg
ttgcacgcctgcagcgaagaccttgaagtgctgctgcgcctgactggcagcctgcctgcg
ccgctgttcgatactcaactggccgccgcctacctgaacctgggtttctccatgggctat
tcgcggctggtgcaggaagtgctgggtatcgagttgcccaagggcgagacccgttccgac
tggttgcaacggcctctgtccgagacgcagatcagctacgcggcagaggatgccgtgcac
ctggcagaagttttcgtactgctgcgcccgaagctttccgacgaaaaataccgctgggtc
ctggaggacggcgccgaactggtggccaacctgcgtcgcgaagtcgacccgtacgaggtc
taccgcgaggccaagctcgcctggaaactgtcccgcgcccaattggccgtgctgcgtgag
ctgtgcgcctggcgcgaacatgaggcgcgggcccgtgacctgccgcgcaatcgcatcatc
cgcgagcattcgctgtggcccctggcccgcacccagccggataacctcggcgcgctggcg
aagatcgaagacatgcacccgcgcaccgtgcgccaggacggccagtttctgctggacctg
atccagcgcgcggccagcgtgccgcccgagcaatggccgccggcggtggccgagccgttg
cccatcgaggccgcggccctggtcaagcgtctgcgggcgctgggacaggctgaagccgag
cgcctggaaattgccccggagctgatgctgcgcaagaaaaccctcgaagcgctgatcaag
agcggcttccccgagggcccttaccaattacccgattcgctgcgtggctggcgccgcgaa
ttgatgggccaggcgctgctcgacagcctggccactgtaggagaacagccttga
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