Pseudomonas ogarae F113: PSF113_1636
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Entry
PSF113_1636 CDS
T01734
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfe03032
]
PSF113_1636
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_1636
Enzymes [BR:
pfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSF113_1636
DNA replication proteins [BR:
pfe03032
]
Prokaryotic type
DNA Topoisomerases
PSF113_1636
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSF113_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEV61660
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Position
1897444..1900113
Genome browser
AA seq
889 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEDGEGTAFDGTLGADVDDVTGDQPLDAAADEEEPQD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgttgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgtcgtcggcgacgtgatcggtaagtatcacccccac
ggcgacactgccgtgtacgacaccatcgttcgtatggcccagccattctccttgcgctac
ctgctggtagacggccagggcaacttcggttccgtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtatcccgaacctgctcgtcaacggctccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgaccgtcgatgagctgatgcaatacatcccgggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcactggccgtggccgcatt
tacatgcgtgcccgctccaccgtcgaagacatcgacaaggtgggtggccgccagcagatc
gtcatcaccgagctgccgtaccagctgaacaaggctcgcctgatcgagaagatcgccgag
ctggtgaaagagaagaagctcgaaggcatcactgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtcgtgatcgagttgcgtcgtggagaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccaactgcaaagcgtgttcggcatcaacatcgttgcgctgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtacgtcaccgtcgc
gaagtggtcacccgccgtaccgtgttcgaactgcgcaaggctcgcgagcgtggtcacatc
cttgaaggccaggccgttgccctgtcgaacatcgacccggtgatcgccttgatcaaggct
tcgccaacgccgtcggaagccaaggaagcgctgatcagcaccccttgggaatcctccgcg
gtggtggcaatggtcgagcgcgctggcgccgactcgtgccgcccggagaacctcgacccg
caatacggcctgcgcgaaggcaagtacttcctgtccccggaacaggcgcaagccatcctg
gaactgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagatcctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccgctggccgcctaccaggcc
cagcgtcgcggcggcaaaggcaagtcggcgaccggcgtcaaggacgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaaaggcaaggtg
tactggctcaagacctatgaaatcccggaagcatcccgtgccgctcgcggccgtccgctg
gtcaacctgttgccgctggacgatggtgagtacatcaccaccatgctgccggtggaggaa
tacaccgaaggtcactacatcttcatggctaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgccagcgcagcgtcggcctgatcgccctggagctggacgaaggc
gacgtgctgatttccgccgccatcaccgacggcgagcgtgaggtcatgctgttctccgac
ggtggcaaggtcactcgcttcaaggagtccgacgtgcgtgccatgggccgtaccgctcgt
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatccccgaa
gaaggcagccagatcctcaccgcttcggcgcgtggttatggcaagcgcacagccatcagc
gagttccctgagtacaagcgtggcggccaaggcgtgatcgccatggtcagcaacgaccgt
aatggtcgtctggtcggtgctgtccaggtgctcgatggcgaggaaatcatgttgatctcc
gaccagggcaccctggtgcgtacgcgagtcgccgaagtgtcgagcctgggccgtaacacc
cagggtgtgacgctgatcaagctggccagcgatgaaacgctggtagggcttgagcgggtg
caggagccatcggaagtcgaaggcgaggagctggaaggcgaggacggcgaaggcacggca
ttcgacggcaccctgggtgccgatgtcgacgacgtgaccggcgaccaaccgctcgacgct
gccgcagacgaagaagaaccgcaggactaa
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