Pseudomonas ogarae F113: PSF113_1685
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Entry
PSF113_1685 CDS
T01734
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfe01002
]
PSF113_1685
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
PSF113_1685
Peptidases and inhibitors [BR:
pfe01002
]
Cysteine peptidases
Family C82
PSF113_1685
Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSF113_1685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AEV61709
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All DBs
Position
1960509..1961480
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AA seq
323 aa
AA seq
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MLPRLPAVARCLSLAALCMAGPVAALELPLPPPGEDIIGQVQVIKAKYEDTFADLGTTYD
LGYSEMVAANPGVDPWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGRNVVY
TFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKLG
LSGGKVYLEAHTPLDDKGNPSVVDKHTAVINAMLKREDITSNLRMNWDVVRDVVAAEDGL
PVEIAIPNTSAPMVTSAPIDLQQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgcttgcctgccgtcgcccgctgcctgtctcttgccgccctgtgtatggcg
ggccccgttgccgcactggagctgcctctgccaccgccgggtgaagacatcattggccag
gtgcaggtcatcaaggccaaatacgaagacaccttcgcagacctgggcaccacctatgac
ctgggctacagcgagatggtcgccgccaaccctggggtcgatccctggttgccgggcgct
ggcaccgagatcgtgctgccgactcgctttatcctgccgccgggcccgcgcgaaggcatc
gtgatcaacctggccgagtaccgtctctactatttccccaaggggcggaacgtggtctac
accttcccgctggggattgggcgtgagggctggggatcgccgatcgcccacaccagcatc
atcgccaagacaccgaacccgacctggaccccgccggcatcgatcaaggccgaacacgcc
gccgacggcgatccgctgccgaatgtcgtgccggccggtcccgataacccactgggcccg
ttcaagttcaccctgggcaccccgggctacctgatccatggttcgaacaagaagttcggc
atcggcatgcggaccagccacggctgcttccggatgttcaacaacaacgtcctggaaatg
gccggcatggtgccggtgggtacatcggtacggatcatcaacgacccttacaagctgggc
ttgagcggtggcaaggtgtacctggaagctcacacaccgttggacgacaagggcaacccg
tcggtggtggacaagcacaccgcagtgatcaacgcgatgctcaagcgtgaagacatcacc
agcaacttgcgcatgaactgggacgtggtgcgggacgtggtggcggccgaagatggcctg
ccggtggaaatcgctattccgaacacctcggcaccgatggtcacgagcgcgccgatcgac
ttgcagcagtaa
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