Pseudomonas ogarae F113: PSF113_1871
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Entry
PSF113_1871 CDS
T01734
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00300
Lysine biosynthesis
pfe00470
D-Amino acid metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01230
Biosynthesis of amino acids
Module
pfe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSF113_1871
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSF113_1871
Enzymes [BR:
pfe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSF113_1871
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AEV61891
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All DBs
Position
2202078..2203070
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AA seq
330 aa
AA seq
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MTQFYDARGNIYGVVSPQQVRDYGIDLPPSAALAAQRRESWTSAAVRAFCSWAPGEAAPD
AKAHRSDGLLIGPFQSEPPFDLLIVNTDGTLAERSGNGLTIFSQALQEQGLMPGAGECVL
QVHHDKPEGISPLQTSVRAAEFEGARGFWLDLGKPLFGPQAVGAQEVESVLFNQCDVSRV
AVLERLNPAWGNSQFVNIGNPHCVTLVAGVEGLPSNSQMRATALAQGLVRIAYAAPGGAG
LPCPSGVNLQWASLEAEGRIAARVFERGEGPTASSGTSASAVASAAWRVGWVQAGAVSVV
MPGGTAPILLEEEAGELVRVRLFGTARLVS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttctatgatgcacgcggcaatatttatggcgtcgtttcaccgcaacaggtg
cgtgactacggcattgatttgccgccgtcagccgccctggctgcacagcggcgcgagtcc
tggacctcggctgcagtgcgtgctttctgcagttgggcgcctggcgaagcagcacctgac
gccaaggcccatcgcagtgacggcctgttgatcggtccgttccagagcgaaccgcctttt
gatctgttgatcgtcaataccgacggcaccctggccgaacgcagcggcaatggcctgacg
attttctcccaggcgctgcaagagcaaggcttgatgccgggggcgggggagtgtgtgctg
caggttcatcatgacaaacctgagggtatctccccgctgcaaacctcggttcgcgccgct
gagttcgaaggcgcccgaggcttctggctggatttgggcaaaccgctgttcgggccccag
gctgttggcgcccaggaggtcgagagcgtgctgttcaaccagtgcgatgtcagccgtgtc
gcggtgcttgagcggttgaacccggcgtggggcaatagccagttcgtgaacattggcaat
cctcattgcgtgacgctggtggcgggtgtcgaagggttgccgagtaattcgcaaatgcgt
gctacggcgctggcgcaaggcctggttcgcatcgcctatgcggcgccaggtggcgccggg
ctgccgtgccccagcggggtgaatctgcaatgggccagtctggaagccgaagggcgaatc
gccgcccgggtgtttgagcgcggcgaaggccccacggcttcctcgggcaccagcgccagt
gccgtggccagtgcggcgtggcgggtgggctgggtgcaggcgggggcggtgagtgtggtg
atgccgggggggactgcgccgattttgctggaagaggaggcgggtgagttggtgcgggtc
aggttgtttgggacggcgcggcttgtgtcgtag
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