Pseudomonas ogarae F113: PSF113_2166
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Entry
PSF113_2166 CDS
T01734
Symbol
trmU
Name
(GenBank) TrmU
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PSF113_2166 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_2166 (trmU)
Enzymes [BR:
pfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PSF113_2166 (trmU)
Transfer RNA biogenesis [BR:
pfe03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PSF113_2166 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AEV62177
LinkDB
All DBs
Position
complement(2538089..2539213)
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AA seq
374 aa
AA seq
DB search
MRDPAPSDTSKQRVIVGMSGGVDSSVSALLLIEQGYEVEGLFMKNWEEDDGTEYCTAMDD
LADAQAVCDKIGIKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDY
AMMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFPVGELEK
PEVRAIAEKHQLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGEIKTTEGEVIGRHHGL
MYHTIGQRQGLGIGGLKDAGEEPWYVLVKDLEHNELIVGQGNDHPWLFSRALLASDIYWV
NPIDLSEPRRLTAKVRYRQSDQPCTLEKTATGYRATFDDPQRAVTPGQSVVFYDGEICLG
GGVIEVAEPWSSKA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatccagctccttctgacacatccaagcagcgcgtcattgtcggcatgtccggc
ggcgtggactcttccgtttccgccctactgctgatcgagcagggttatgaggtggaaggc
ctgttcatgaagaactgggaagaagacgacggcaccgaatactgcaccgccatggacgac
ctggcggacgcccaggccgtgtgcgacaagattggcatcaagctgcacactgccaacttc
gccgccgagtactgggacaacgtcttcgagcacttcctggccgaatacaaggccggccgc
acgccgaacccggacatcctctgcaaccgcgaaatcaagttcaaggcgttcctcgactac
gccatgatgctcggcgccgacctgatcgccaccggccactacgtgcgccgccgcgacatc
gacggccgcaccgaactgctcaagggcctggacccgaacaaggaccagagctacttcctg
catgccgtcggcggcgagcagatcgccaagaccctgttcccggtaggcgaactggaaaag
cccgaagtgcgcgcgatcgccgaaaaacaccagctcgccaccgccaagaaaaaagactcc
accgggatctgctttatcggtgagcggcgcttcagcgacttcctcaagcaatacctgccg
gcccagccgggcgagatcaagaccaccgaaggcgaagtcattggccgtcaccatggcctg
atgtaccacaccatcggccagcgccagggccttggcatcggcggcctgaaagacgccggg
gaagagccgtggtacgtgctggtcaaggacctggagcacaacgagctgatcgtcggccag
ggcaacgaccatccatggttgttttcccgcgccctgctcgcctccgacatctactgggtc
aacccgatcgacctcagcgaaccgcgtcgcctgacggccaaggtccgctaccgccagagc
gaccagccctgcaccctggaaaaaaccgccacgggctaccgcgccaccttcgatgacccg
cagcgggcggtcacgcccggccagtccgtggtgttctatgacggcgaaatctgcctgggc
ggcggcgtgatcgaagtcgcagagccttggagcagcaaggcatga
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