Pseudomonas ogarae F113: PSF113_2415
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Entry
PSF113_2415 CDS
T01734
Symbol
impD
Name
(GenBank) ImpD
KO
K11903
type VI secretion system secreted protein Hcp
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02025
Biofilm formation - Pseudomonas aeruginosa
pfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSF113_2415 (impD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSF113_2415 (impD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_2415 (impD)
Secretion system [BR:
pfe02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSF113_2415 (impD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
AEV62424
LinkDB
All DBs
Position
complement(2816151..2816648)
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AA seq
165 aa
AA seq
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MDAIILDLGGDIKGDSLLEGFTDKIEVMSYSHNVAMQVTNDVSNSERTSGRPHIGEFTLT
KFIDSSTPSLNEYCCAGKPIPQAVITIGRNAAEGSGQIMPFIVYTLTNVVLSNVSVSGGT
GGKPVETLSLNFTKIKWELTAQKDDGTKEGTAGTTWDLAANKMTK
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatcattctcgacctcggcggcgacatcaagggcgacagcctgctggagggt
ttcacggacaagatcgaggtcatgtcctacagtcacaacgtggcgatgcaggtcaccaac
gacgtcagcaactcggagcgtacctccggccggccgcacatcggcgaattcaccctgact
aaattcatcgacagttccaccccttcgctcaatgagtattgctgcgccggcaagccgatc
ccgcaagccgtcatcaccatcggccgcaacgccgccgagggcagcggccagatcatgccg
ttcatcgtctacaccctgaccaacgtcgtgctgtccaacgtcagtgtcagcggcggcacc
ggcggcaaaccggtggaaaccctgtcgctgaacttcaccaagatcaaatgggagctcacc
gcgcagaaagacgacggcaccaaggaaggcacggcgggtacgacctgggacctggccgcc
aacaaaatgaccaagtaa
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