Pseudomonas ogarae F113: PSF113_2422
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Entry
PSF113_2422 CDS
T01734
Symbol
impA
Name
(GenBank) ImpA
KO
K11902
type VI secretion system protein ImpA
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSF113_2422 (impA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_2422 (impA)
Secretion system [BR:
pfe02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSF113_2422 (impA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
DUF4100
Motif
Other DBs
NCBI-ProteinID:
AEV62431
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All DBs
Position
2825623..2826705
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AA seq
360 aa
AA seq
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MSLPISPLPELVSQLLEPISAESPCGPDLRYEPEYDQLRELRREDDTSLPTGVWQSSVKR
ALWPDLERLATTLLLERSKDLMISAWLGEAWLHMAGLEGLPGSLALVAGLCERYPEQLHP
QAEEGDQSWRVIPLEWLARRYSEVLLTRVPLFDGREQAFAAFCLDDWQRLQRQQVLVNDS
KNAKASAEAARSDQKKLSELIRNTPLSFWLHRQGSLMLSLQHLQRLEAWSDAYLGNLAPG
YKSLQDVMQALLALVEEFIAMHPQQPTVAPVQTSPATTTSTPQPQAAPAQVFQEPANREE
AYRQLLVIAGYLARTEPHSPVPYLIRRGVEWGNKPLSELLGELISADAESRRLWTLLGVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgccgatatcgcctttgcctgagctggtcagccaattgctcgagccgatcagc
gccgaatcgccctgtggcccggacctgcgctacgaaccggaatatgaccagttgcgcgaa
ttgcgccgggaggacgacaccagcctgcccactggtgtgtggcagtcttctgtcaagcgc
gccctgtggccagacctggaacggctcgcgaccacgttgctgcttgagcgcagcaaggac
ctgatgatcagcgcctggctgggggaggcctggctgcatatggccgggctggaagggttg
ccgggcagtctggcgttggtggcagggctgtgtgagcgctatccggagcagttgcacccc
caggccgaggaaggcgaccagtcatggcgggtgatccccctggagtggttggcccgtcgc
tacagcgaagtgctgctgacgcgggtgccgttgttcgacggccgggaacaggccttcgcc
gctttctgcctggacgactggcaacgcttgcagcgccagcaagtgttggtcaacgacagc
aagaacgccaaggcctcggccgaagcggcgcgcagcgatcaaaagaagctcagcgaactg
attcgcaacacacccttgtcgttctggttgcatcgccagggcagtctgatgttgagtctg
caacacctgcaacggctcgaagcttggagcgacgcttacctgggcaacctggccccgggc
tacaaatccctgcaggacgtgatgcaggccttgctggcactggtagaggagttcatcgcg
atgcacccacagcaacccaccgtcgcgccggtgcaaacgtccccggcgaccacgacgtcg
acgccccagccgcaggcagcacctgcccaggtcttccaggaaccggccaatcgtgaagag
gcctaccgacagctactggtcatcgccggttacctggcccgtaccgaaccccacagcccg
gtgccctacctgatccggcgcggtgtggagtggggcaacaagccgttgagcgagttgttg
ggtgagctgatcagtgccgatgccgaatcccggcgcttgtggacgttattgggcgttctc
taa
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