Pseudomonas ogarae F113: PSF113_2720
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Entry
PSF113_2720 CDS
T01734
Symbol
kaiC
Name
(GenBank) KaiC
KO
K08482
circadian clock protein KaiC
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PSF113_2720 (kaiC)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
Rad51
DnaB_C
AAA_16
nSTAND3
PAXNEB
AAA_5
SLFN-g3_helicase
IstB_IS21
AAA_24
MEDS
AAA_22
PhoH
NPHP3_N
CbiA
AAA_7
DEAD
AAA_11
AAA
AAA_19
ResIII
AAA_30
GvpD_P-loop
Mg_chelatase
NACHT
Zot
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-ProteinID:
AEV62724
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Position
complement(3193767..3195269)
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AA seq
500 aa
AA seq
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MSTSNELISAKAATGIEGLDNVLSGGLSRGHVFLLEGEPGTGKTTVALHFLLAGAKVGER
SLYITLSETERELRQGATSHGWTLDDNIHIFELTPPESLLNAEHQQSLLYSSDLELGEAT
RQIFEVVERVKPTRVVLDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRIRVVKYRGQKYRGGYHDFTIMGDGVHVFPRL
VAAEHRGQYLRQQLSSGISEMDSLLGGGIETGSSTLILGPAGTGKSLISLIFAAAAVHRG
EKAALFIFDEELGLLFERMKNIGIDLQALQETGNLLIEQVDAAELSPGEFSHRVRRCVDE
GDIKTVVIDSINGYQAAMPEENALVLHMHELLLYLNRKGAATFMTVAQHGLVGDMQAPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRISALGMTIGEPLEAFQGV
LRGVPTYMGESNPLLKDEHR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacatctaacgagttgatcagtgcaaaagccgccaccggcatcgaaggactggac
aacgtcctttccggtggtttgtcccgcggccatgtgttcctgcttgagggggaaccgggg
actggtaagaccacggtcgcgctgcattttctgttggccggcgccaaggttggtgagcgc
tcgttgtacatcacgctatcggaaaccgagcgtgaactgcgtcagggcgcaacctcccac
gggtggacgctggacgacaacattcatattttcgagctgaccccgcccgaaagcctgctc
aatgccgagcaccagcagagtttgctgtattcctcggacctggagctgggcgaggcgacc
cggcagatcttcgaagtggtcgaacgagtcaaaccgacccgggtcgtgctcgacagcctg
tcggagattcgcctgctggcgcaaagctccctgcgctatcgtcgccagatcctcgcgatc
aagcactacttcgtgcgctacgacgccacggtcctgttgctcgacgacctgaccaccgag
tccctggacaagaccgtccacagtgtcgcccacggggtgattcgcctggaagaactgacg
cccaactatggcgccgaacggcggcggatccgggtggtcaagtatcgcgggcagaaatac
cgtggcggttaccatgacttcaccatcatgggcgacggcgtacacgtcttcccacgcctg
gtggccgccgaacaccgtggccagtacctgcgccaacaactctccagcggtatcagcgaa
atggactcgctgctgggcggcggtatcgagaccggttccagcacgttgatcctgggcccg
gcgggaaccggcaagtcgctgatctcgctgatttttgccgcagccgcggtacatcgcggc
gagaaggccgcgctattcatcttcgacgaagaactgggcttgctgttcgagcgcatgaaa
aacatcggcatcgatctgcaggccctgcaagagaccggcaacctgctgatcgaacaggtg
gacgcagccgagctgtcccccggcgagttctcccatcgcgtgcgccgttgcgtcgatgag
ggcgacatcaagaccgtggtcatcgacagcatcaacggttaccaggcggccatgccggaa
gagaatgccctggtgctgcacatgcatgaattgttgctctatctcaaccgcaagggcgcg
gcgaccttcatgaccgtagcccagcacggcctggtcggcgacatgcaggcacccgtggac
attacttacctggccgacacggtgattctgttgcgttatttcgaagcactgggcaaggtt
cgccgggcgatttccatcatcaagaaacgcaccggcagccacgagtcgaccatccgcgaa
taccgcatcagcgccctgggcatgaccatcggcgagccgctggaggcgttccaaggcgtc
ctgcggggggttcccacctacatgggcgagagcaacccgctgctcaaggatgaacaccgg
tga
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