Pseudomonas ogarae F113: PSF113_2965
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Entry
PSF113_2965 CDS
T01734
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfe03000
]
PSF113_2965
Transcription factors [BR:
pfe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSF113_2965
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_5
PBP_like_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEV62969
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Position
complement(3491960..3492844)
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AA seq
294 aa
AA seq
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MNVSFRQLRAFILIAETSSFTRTAEQLHLSQPALSYSVRKLEESMGLQLLARNTRSVELT
PAGEHFLPQARRMLRDMNDAVRDARDTLSLSRGTLRLAALPTAAASFLPIAIAAFQRENP
GVTVSLLDGRAGEIMGWVQRGEVDAGISSLPDDLSGLSFVRLLDDNLVLLSHKDLQRDGQ
DDWKRQPYIALTPDTSIRPLADAALRYLNVDPVPAWEVAHMSTATALVREGLGFSLLPAS
CTAVFNIGEQCGVTTIDQPAKRSIGLLQRKPLAQSPSLSQFMQHLRQVLLSHGH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttcttttcgtcagcttcgtgccttcatccttattgccgagacttcgagcttt
actcgcacggccgaacagttgcacctgtcccagccagcgctgagctatagcgtccgcaaa
ctggaagagagcatggggttgcagttgctcgcgcgtaacacccgcagcgtcgagctgacg
cccgccggtgagcacttcttgccccaggcccggcgcatgctgcgggacatgaacgacgcc
gtgcgcgatgctcgcgacaccttgagcctgagccgtggcacgctccgattggcagccttg
cccaccgctgccgcgtcgttcctgccgatcgccattgcagctttccagcgtgaaaaccct
ggtgtgacggtgagcttgctggacggccgcgccggggaaatcatgggctgggtgcagcga
ggagaggtggacgccggcatcagttcgttgcctgacgatctttccggactgagctttgtg
cgcctgttggatgacaatctggtgttgctgagccacaaggacctgcagcgtgacggccag
gacgactggaagcggcaaccctatattgccctcacgcctgacaccagcatccggcccctg
gcagacgctgcgttgcgctacttgaacgtcgatcctgtgccggcctgggaagtggcgcac
atgagcacggccacggccctggtgcgcgaaggattggggttttctctgttgccggccagt
tgcacggcggtgttcaacatcggtgagcagtgtggtgtcaccaccatcgaccagccggcg
aaacgctcgatcggcctgttgcaacgcaagccgctggcccaatcaccttcgttgagccag
ttcatgcagcatttgcggcaggtgctgctcagccacggacactga
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