Pseudomonas ogarae: PSF113_3093
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Entry
PSF113_3093 CDS
T01734
Name
(GenBank) Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
Organism
pfe
Pseudomonas ogarae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
AAA_2
PAS
PAS_9
Xre-like-HTH
AAA
MLTR_LBD
HTH_23
HTH_11
Mg_chelatase
HTH_22
HTH_28
AAA_16
HTH_Tnp_ISL3
HTH_17
PAS_8
HTH_20
RWP-RK
HTH_Tnp_1_2
HTH_29
HTH_24
HTH_50
Phage_CI_repr
TetR_N
HTH_AsnC-type
HTH_36
TIP49
MCM
Motif
Other DBs
NCBI-ProteinID:
AEV63095
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Position
3649807..3651129
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AA seq
440 aa
AA seq
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MTHNLPPTQDLLPHPDQVQSLVSFLEHEPQPMIVLDPDYNILAANTAYLRQFGSADRPFI
GHKCYRVSHHYDVPCDQAGEHCPMKKAREMRGPDRVLHIHHTPRGPEHVDVELRPILNEH
GVISAYVERLTLVRSASARPSNEGLVGSSPAFNQALLELQRVAPSMLPVLLLGESGTGKE
LFARAVHETSERAAGPFVVVDCSGLTETLFESELFGHEKGAFTGATVRKVGLVETAQGGT
LFLDEIGDVPLAMQVKLLRLIESGTYRRVGSVETLHADFRLVAATHKPLEKMLEKGEFRQ
DLYYRISVFPIHLPPLRHRLEDIGLLVDSFLQRSGIGKRRLSIDPEALMQLQRFAWPGNI
RELRNVLERAALFADDGVIHSLHLPATPVALFAPALTPAPASRDLEQLVATFKGTRSELA
RHLGVSERTLYRRLKEQGLA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaacctgccgcccacccaagacctgcttccgcatccagaccaggtgcagtcc
ctggtctcgtttctggagcacgagccccagccgatgatcgtcctcgatcccgattacaac
atcctggcggcgaacacggcttacctgcgtcagttcggcagcgccgacaggccgttcatt
ggccataagtgttatcgggtttcccaccactacgatgtgccttgtgaccaggccggtgag
cactgcccgatgaaaaaggccagggagatgcgcggcccggatcgtgtcttgcacatccac
cacaccccgcgcgggcctgaacacgtcgacgtggaactgcgcccgatcctcaatgaacat
ggcgtcatcagcgcctatgtggagcgtcttaccctggtgcgtagcgcatcggcccggccc
agtaatgaggggctggtgggcagttcgccagcctttaatcaggcactgttggaactgcag
cgggtagcgccttcaatgttgccggtcctgctgctgggagagtccggcaccggcaaggag
ctgtttgcccgcgccgtccatgaaaccagcgagcgggccgcgggaccctttgtcgtggtc
gattgctccgggttgaccgaaaccttgttcgagagcgaactgttcggccacgagaagggc
gcgtttaccggcgccaccgtgcgcaaggtgggcctggtggagacggcccagggcggtacg
ctgtttctcgatgagataggcgacgttcccctggccatgcaggtgaaactgttgcgattg
atcgagtcgggcacctatcgccgtgtcggcagtgtggaaaccctgcacgcggatttcagg
ttggtggccgcgacccataagcctttggaaaaaatgctcgagaaaggcgagttcaggcag
gacctctattaccgcatcagcgtttttcccatccatttaccgcccttgcgtcatcgcctt
gaggacatcggcttgttggtggattcattcttgcaacgttccgggatcggtaagcgtcgg
ctgagcatcgatcccgaggcgctgatgcaattgcagcggtttgcctggccgggcaacatc
cgcgagctgcgcaatgtcctggaaagagctgcgctgtttgccgacgacggcgtcattcac
tccctgcatctgcccgcgacccccgtggcgttgttcgccccagccttgacgcccgcgccc
gctagcagggacctggaacagctcgtggccactttcaaaggcacccgcagcgaactggcc
agacacctgggcgtgagtgaacgcacgttgtaccggcggttgaaagaacaaggcctggcc
tga
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