Pseudomonas ogarae F113: PSF113_3113
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Entry
PSF113_3113 CDS
T01734
Name
(GenBank) Outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe01501
beta-Lactam resistance
pfe02020
Two-component system
Module
pfe_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_3113
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSF113_3113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfe02000
]
PSF113_3113
01504 Antimicrobial resistance genes [BR:
pfe01504
]
PSF113_3113
Transporters [BR:
pfe02000
]
Other transporters
Pores ion channels [TC:
1
]
PSF113_3113
Antimicrobial resistance genes [BR:
pfe01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSF113_3113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AEV63115
LinkDB
All DBs
Position
complement(3672262..3673254)
Genome browser
AA seq
330 aa
AA seq
DB search
MLPAPHHSTVALKPLWLLALLTGSAAPAMAAELAQSMPGLLDGATLQVLSRNFYLNNDYR
TPTPAGKSYKQEWAQGFIASFESGFTPGTIGVGIDAHAFLGLKLDGGKGHSGTGLLPLDE
NGRSEDHYSSAGGALKFNTSRTTLAVGEMTVQSPVFDTADKRLQPEYASGLLLSSREFEE
VDLQAGHFSAFKNQDASTSKGDFSGYGATTRNGAIDFIGADLFTGQALGGALYASELSDT
WRQYYANLHATLGELFLDGNLYHTRDDGKAIAGAIDTTAYSLSSKYRLNTQAFTLAYQKI
NGDTPFDFVGGDDIDRLYIVVQYPLKPGPF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgcaccacaccactcaaccgtcgccctgaaaccgctgtggctgcttgccctg
ctcaccggcagcgccgcaccggcgatggcagcggaactcgcgcaaagcatgcctggcctt
ctcgacggggcgacattgcaagtcctcagccgcaacttctacctcaacaatgactatcgc
accccgaccccggcaggcaaaagctacaaacaggaatgggcccagggcttcatcgcctcg
ttcgagtccggcttcacccccggcacgatcggcgtaggcatcgatgcccacgcgttcctg
ggattgaaactggacggcggcaaggggcattccggaacgggattattgccgctggatgag
aacgggcgaagcgaggaccactactccagcgccggcggcgcgctgaaattcaacacctca
cgcaccaccctggcggtcggcgaaatgactgtgcagagcccggtattcgataccgcagac
aagcgcctgcaacccgaatacgccagcggcctgctgctctccagccgcgagttcgaagag
gtcgacctgcaggcgggccacttcagtgcgttcaagaatcaggacgcttcgaccagcaag
ggtgacttttccgggtatggggcgacgacgcgcaacggcgccatcgacttcatcggcgcc
gacctgttcaccggccaagccctgggcggcgcgctctacgcctccgaactgagtgatacc
tggcgccagtactatgccaacctgcatgccacccttggcgaactgttcctcgacggcaac
ctgtaccacacccgcgacgatggcaaggccattgccggggccatcgacaccacagcctat
agcctgagcagcaagtaccggctcaatacccaggcgttcaccctggcctatcagaaaatc
aacggcgacacgcccttcgatttcgtcggcggcgatgacatcgaccggctgtatatcgtc
gtccagtacccactcaagccggggccgttctga
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